RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TMEM222Q9H0R3 208 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PDFQ9HBH1 243 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PRNDQ9UKY0 176 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 MEGF6O75095 1541 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 DOCK6Q96HP0 2047 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 IGSF9BQ9UPX0 1349 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 A0A1W2PQ67 120 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF729A6NN14 1252 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-204ENST00000412061 A8MWP4 228 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 TRGV3P03979 118 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 C8GP07360 202 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 GLRXP35754 106 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 NOVP48745 357 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 NCALDP61601 193 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 HOXC5Q00444 222 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 TNFAIP8L3Q5GJ75 292 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 Q6ZS49 121 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 RNF175Q8N4F7 328 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF433Q8N7K0 673 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-204ENST00000412061 OR4K13Q8NH42 304 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 SGMS2Q8NHU3 365 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 RMI2Q96E14 147 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 NMNAT3Q96T66 252 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF2Q9BSG1 426 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-204ENST00000412061 CCDC90BQ9GZT6 254 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 OR2D2Q9H210 308 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 LYRM2Q9NU23 88 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-204ENST00000412061 AK3Q9UIJ7 227 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 CELA1Q9UNI1 258 aa2.91□□□□□ -1.94
BRCA1-204ENST00000412061 DSCAML1Q8TD84 2053 aa2.9□□□□□ -1.94
BRCA1-204ENST00000412061 KIF1BO60333 1816 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 A0A0J9YY10 115 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 A0A1B0GX78 115 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 MAP1LC3B2A6NCE7 125 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 A6NED7 52 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 A8MU10 97 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 ARPC5O15511 151 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF682O95780 498 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 IGKV1D-33P01593 117 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 IGKV1-33P01594 117 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 LINC00869P0C866 280 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 SCGB1A1P11684 91 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 SPI1P17947 270 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF140P52738 457 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-204ENST00000412061 IBA57Q5T440 356 aaKnown RBP2.9□□□□□ -1.95
BRCA1-204ENST00000412061 GLT8D1Q68CQ7 371 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 SCXQ7RTU7 201 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 OSR2Q8N2R0 312 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 EIF4E3Q8N5X7 224 aaKnown RBP2.9□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF615Q8N8J6 731 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF721Q8TF20 911 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 GPR146Q96CH1 333 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 RNF5Q99942 180 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 PBDC1Q9BVG4 233 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 MAP1LC3BQ9GZQ8 125 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 SH3BGRL3Q9H299 93 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 SSR3Q9UNL2 185 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 GINS2Q9Y248 185 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 HSPB11Q9Y547 144 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 TMEM56-RWDD3S4R434 201 aa2.9□□□□□ -1.95
BRCA1-204ENST00000412061 DICER1Q9UPY3 1922 aaKnown RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 YTHDC2Q9H6S0 1430 aaKnown RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 RALGAPA2Q2PPJ7 1873 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 ATRXP46100 2492 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 OTOFQ9HC10 1997 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 PRORSD1PA6NEY8 169 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 DNAH10OSP0CZ25 163 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 ATP6V0CP27449 155 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 TAS2R45P59539 299 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 RHEBQ15382 184 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 SURF2Q15527 256 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 TMEM78Q5T7P6 136 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 SAMD13Q5VXD3 122 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 Q5W150 140 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 DCUN1D2Q6PH85 259 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 GPHB5Q86YW7 130 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 FAM24BQ8N5W8 94 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 PACRGLQ8N7B6 248 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 PYURFQ96I23 114 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 WDR61Q9GZS3 305 aaKnown RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 C11orf68Q9H3H3 251 aaKnown RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 PARVBQ9HBI1 364 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 ACER3Q9NUN7 267 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 RPUSD1Q9UJJ7 312 aaKnown RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 CYSLTR1Q9Y271 337 aa2.89□□□□□ -1.95
BRCA1-204ENST00000412061 DENND4BO75064 1496 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-204ENST00000412061 SCN1AP35498 2009 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 ARHGEF10O15013 1369 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 CPDO75976 1380 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 CDC42BPBQ9Y5S2 1711 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 RPRD2Q5VT52 1461 aaKnown RBP2.88□□□□□ -1.95
BRCA1-204ENST00000412061 TRBV20OR9-2A0A075B6H5 130 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 H7C1C5 153 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 PLA2G10O15496 165 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 ORC5O43913 435 aa2.88□□□□□ -1.95
BRCA1-204ENST00000412061 NDUFC2O95298 119 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms