RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RPL22L1Q6P5R6 122 aaKnown RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 ZNF880Q6PDB4 577 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 UNQ9165/PRO28630Q6UXU0 137 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 Q6ZR54 194 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 Q6ZRM9 215 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 Q6ZTC4 211 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 CEACAM19Q7Z692 300 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 APRG1Q8IVJ8 170 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 UBE2DNLQ8IWF7 75 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 CDH26Q8IXH8 852 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 MMD2Q8IY49 270 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 SVOPQ8N4V2 548 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 Q8NAQ8 132 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 OSR1Q8TAX0 266 aaPredicted RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 SETD6Q8TBK2 473 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 ADTRPQ96IZ2 230 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 FYTTD1Q96QD9 318 aaKnown RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 CIB1Q99828 191 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 FAAP24Q9BTP7 215 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 THTPAQ9BU02 230 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 GABARAPL3Q9BY60 117 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 DAZ1Q9NQZ3 744 aaKnown RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 SLC2A9Q9NRM0 540 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 PLEKHJ1Q9NW61 149 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 ARGLU1Q9NWB6 273 aaPredicted RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 RDH8Q9NYR8 311 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 THYN1Q9P016 225 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 OR1A1Q9P1Q5 309 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 GHRLQ9UBU3 117 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 MGAT4AQ9UM21 535 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 EXOGQ9Y2C4 368 aaKnown RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 ARL2BPQ9Y2Y0 163 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 RBM7Q9Y580 266 aaKnown RBP1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 S4R3C0 116 aa1.72□□□□□ -2.13
RNU4-53P-201ENST00000410828 APOBP04114 4563 aaKnown RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGLV11-55A0A075B6I3 123 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRAV8-7A0A075B6U6 113 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRBV6-6A0A0A6YYG2 114 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGHV3-35A0A0C4DH35 117 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRBV5-5A0A0J9YX44 114 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TCRBV3S1A0A5B6 114 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 MFSD2BA6NFX1 497 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 HMX3A6NHT5 357 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 C15orf62A8K5M9 175 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRDCB7Z8K6 153 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 K7EMT4 169 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 NDUFA4O00483 81 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 DFFBO76075 338 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CD74P04233 296 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CD5P06127 495 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CRYGCP07315 174 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CTSDP07339 412 aaPredicted RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 IL6RP08887 468 aaPredicted RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 UBBP0CG47 229 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RBMY1A1P0DJD3 496 aaKnown RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RBMY1CP0DJD4 496 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SAA1P0DJI8 122 aaPredicted RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 INAFM2P0DMQ5 153 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 AREGP15514 252 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPA2P15927 270 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SRMP19623 302 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CALB2P22676 271 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 PTBP1P26599 531 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 HTR2CP28335 458 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 GPR183P32249 361 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 MAS1LP35410 378 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPL27AP46776 148 aaKnown RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TFPI2P48307 235 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 PSMD7P51665 324 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPS27AP62979 156 aaKnown RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 PAFAH1B2P68402 229 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 HLA-DRB3P79483 266 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TNP2Q05952 138 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 IRF3Q14653 427 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ATP6AP1Q15904 470 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF124Q15973 351 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 KLK9Q2XQG4 91 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 C12orf74Q32Q52 190 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RNF212Q495C1 297 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q499Y3 187 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 YIF1BQ5BJH7 314 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR2G6Q5TZ20 316 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 XAF1Q6GPH4 301 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SPSB3Q6PJ21 355 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMPRSS11AQ6ZMR5 421 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 IDO2Q6ZQW0 420 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SSX9Q7RTT3 188 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF367Q7RTV3 350 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 C6orf201Q7Z4U5 140 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 NKAIN3Q8N8D7 197 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 VSTM2AQ8TAG5 236 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF502Q8TBZ5 544 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM190Q8WZ59 177 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ORAI1Q96D31 301 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 LGALS12Q96DT0 336 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SMIM19Q96E16 107 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CYYR1Q96J86 154 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM210BQ96KR6 192 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q96MT0 163 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CMTM3Q96MX0 182 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms