RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 INSIG2Q9Y5U4 225 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
CHMP3-204ENST00000409727 CHST1O43916 411 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 GAPDHP04406 335 aaKnown RBP10.08□□□□□ -0.8
CHMP3-204ENST00000409727 IAPPP10997 89 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 LYL1P12980 280 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 S100A11P31949 105 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 CAV2P51636 162 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 VAMP2P63027 116 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 MIDNQ504T8 468 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 FLYWCH2Q96CP2 140 aaKnown RBP10.08□□□□□ -0.8
CHMP3-204ENST00000409727 HARBI1Q96MB7 349 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 QTRT1Q9BXR0 403 aaKnown RBP10.08□□□□□ -0.8
CHMP3-204ENST00000409727 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.08□□□□□ -0.8
CHMP3-204ENST00000409727 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 IGHV1-3A0A0C4DH29 117 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 LEUTXA8MZ59 168 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 E5RGE8 158 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 RNF223E7ERA6 249 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 H3BP45 60 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 HRASP01112 189 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 HKR1P10072 659 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 RPL12P30050 165 aaKnown RBP10.07□□□□□ -0.8
CHMP3-204ENST00000409727 RPS16P62249 146 aaKnown RBP10.07□□□□□ -0.8
CHMP3-204ENST00000409727 TPTE2P1Q5T6R2 138 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 OR4A16Q8NH70 328 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 RITA1Q96K30 269 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 ABCA2Q9BZC7 2435 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 NBPF19A0A087WUL8 3843 aa10.07□□□□□ -0.8
CHMP3-204ENST00000409727 IGHV3OR16-10A0A075B7F0 116 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 A0A0D9SG52 128 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 ODF3BA8MYP8 253 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 LY6LH3BQJ8 138 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 OR2F2O95006 317 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 MSMBP08118 114 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 PVALBP20472 110 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-204ENST00000409727 LGALS4P56470 323 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 OR2F1Q13607 317 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 ZNF345Q14585 488 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 SSX2Q16385 188 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 DHRS7BQ6IAN0 325 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-204ENST00000409727 PDPNQ86YL7 162 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 C17orf50Q8WW18 174 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 COA4Q9NYJ1 87 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 DPM3Q9P2X0 92 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 POLR3KQ9Y2Y1 108 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-204ENST00000409727 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 FAM24AA6NFZ4 105 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 SYNGR2O43760 224 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 TMEM50AO95807 157 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 RRASP10301 218 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 CEACAM3P40198 252 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 RAB13P51153 203 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 TNFRSF9Q07011 255 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 OR8H1Q8NGG4 311 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 SMIM3Q9BZL3 60 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 RBKSQ9H477 322 aa10.06□□□□□ -0.8
CHMP3-204ENST00000409727 UNKLQ9H9P5 680 aaKnown RBP10.06□□□□□ -0.8
CHMP3-204ENST00000409727 GCN1Q92616 2671 aaKnown RBP10.05□□□□□ -0.8
CHMP3-204ENST00000409727 TIMM23O14925 209 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 SNAPC5O75971 98 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 IFNA17P01571 189 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 OPN1MWP04001 364 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 SAA1P0DJI8 122 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-204ENST00000409727 OPN1MW2P0DN77 364 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 OPN1MW3P0DN78 364 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 MYOD1P15172 320 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 C4BPBP20851 252 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 CD24P25063 80 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 MC5RP33032 325 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 UBE2KP61086 200 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 RELBQ01201 579 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 PAX8Q06710 450 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 LRRC75A-AS1Q8N1F1 130 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-204ENST00000409727 Q96MF0 132 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 AQP10Q96PS8 301 aa10.05□□□□□ -0.8
CHMP3-204ENST00000409727 MS4A7Q9GZW8 240 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-204ENST00000409727 A0A1W2PPI3 338 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 B4DSR2 109 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 SPDEFO95238 335 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 P2RY1P47900 373 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 TMEM177Q53S58 311 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 DYNAPQ8N1N2 210 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 OR2C3Q8N628 320 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 BSCL2Q96G97 398 aaPredicted RBP10.04□□□□□ -0.8
CHMP3-204ENST00000409727 ZNF471Q9BX82 626 aaPredicted RBP10.04□□□□□ -0.8
CHMP3-204ENST00000409727 GON7Q9BXV9 100 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 C11orf1Q9H5F2 150 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 SLA2Q9H6Q3 261 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 HIF1ANQ9NWT6 349 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 HSPB7Q9UBY9 170 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 NUP50Q9UKX7 468 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 SVEP1Q4LDE5 3571 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 A0A096LNT2 108 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms