RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 WNT2BQ93097 391 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 PLXND1Q9Y4D7 1925 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 A0A1W2PPV9 198 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 PEX11BO96011 259 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 C1QAP02745 245 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 TMEM191AQ9H0A3 160 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 LAMB2P55268 1798 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 COX6A1P12074 109 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 CEACAM1P13688 526 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 CSRP2Q16527 193 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 WDR73Q6P4I2 378 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 NFAM1Q8NET5 270 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-203ENST00000409672 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-203ENST00000409672 RNASEH2CQ8TDP1 164 aaKnown RBP7.21□□□□□ -1.26
SCN9A-203ENST00000409672 YIPF6Q96EC8 236 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 LOXL4Q96JB6 756 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 SCN4AP35499 1836 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 QSER1Q2KHR3 1735 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF407Q9C0G0 2248 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 A0A0G2JMM0 328 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 A0A1W2PPB8 328 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 A0A1W2PRS3 328 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 KIR3DP1A8MWS1 328 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 RFPL3SP0C7P2 107 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 BHLHA9Q7RTU4 235 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 NDUFB6O95139 128 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 TSPAN13O95857 204 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 WFIKKN1Q96NZ8 548 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 HS3ST3B1Q9Y662 390 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 CDS2O95674 445 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 TSPOP30536 169 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 MC5RP33032 325 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 P2RY6Q15077 328 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 KIAA1644Q3SXP7 199 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF585BQ52M93 769 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 SLC16A13Q7RTY0 426 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 QTRT1Q9BXR0 403 aaKnown RBP7.2□□□□□ -1.26
SCN9A-203ENST00000409672 NPVFQ9HCQ7 196 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 UNC119Q13432 240 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 C12orf73Q69YU5 71 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 CLDN34H7C241 214 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 HPRT1P00492 218 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 CELA3BP08861 270 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 IL24Q13007 206 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF385CQ66K41 422 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-203ENST00000409672 C12orf54Q6X4T0 127 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 MTFP1Q9UDX5 166 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF107Q9UII5 783 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-203ENST00000409672 BRCA1P38398 1863 aaKnown RBP7.2□□□□□ -1.26
SCN9A-203ENST00000409672 PSME4Q14997 1843 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 B9A039 149 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 NPIPB11E5RHQ5 1161 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 PDE6DO43924 150 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF343Q6P1L6 599 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 OR5AN1Q8NGI8 311 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 OR1P1Q8NH06 330 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 C2orf88Q9BSF0 95 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 EXOGQ9Y2C4 368 aaKnown RBP7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ZXDCQ2QGD7 858 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-203ENST00000409672 SPACA3Q8IXA5 215 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 Q9N2K0 584 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ST6GALNAC2Q9UJ37 374 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 FBXL7Q9UJT9 491 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 A0A1W2PQM1 296 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 ERVK11-1P61568 191 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 XAF1Q6GPH4 301 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 LINC00305Q7Z4B0 112 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 PPP1R27Q86WC6 154 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 SFXN3Q9BWM7 321 aa7.2□□□□□ -1.26
SCN9A-203ENST00000409672 TRBV20OR9-2A0A075B6H5 130 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 H0YL77 283 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 NDUFA3O95167 84 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 BGLAPP02818 100 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 CGB7P0DN87 165 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 TMEM95Q3KNT9 176 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 ABHD1Q96SE0 405 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 MAP1LC3AQ9H492 121 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 ICAM4Q14773 271 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 IBA57Q5T440 356 aaKnown RBP7.19□□□□□ -1.26
SCN9A-203ENST00000409672 SLC25A28Q96A46 364 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 ODAMA1E959 279 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 CD7P09564 240 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 ST6GAL2Q96JF0 529 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 TRBV7-9A0A0J9YWB2 115 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 MGST3O14880 152 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 SRSF4Q08170 494 aaKnown RBP7.19□□□□□ -1.26
SCN9A-203ENST00000409672 Q5PR19 223 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 WDR82Q6UXN9 313 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 TTC9CQ8N5M4 171 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 SPAG8Q99932 426 aaPredicted RBP7.19□□□□□ -1.26
SCN9A-203ENST00000409672 B4DEV8 164 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 HOXD4P09016 255 aaPredicted RBP7.19□□□□□ -1.26
SCN9A-203ENST00000409672 SFTA2Q6UW10 78 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 LSM10Q969L4 123 aaKnown RBP7.19□□□□□ -1.26
SCN9A-203ENST00000409672 GALNT14Q96FL9 552 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms