RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FAM19A2Q8N3H0 131 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 MED10Q9BTT4 135 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 REG4Q9BYZ8 158 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 AGPAT3Q9NRZ7 376 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 NAT8Q9UHE5 227 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 C9JCJ5 164 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 PPBPP02775 128 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 TRGC1P0CF51 173 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 HIST1H4AP62805 103 aaKnown RBP0.52□□□□□ -2.33
PMS1-203ENST00000409593 C9orf64Q5T6V5 341 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 BLIDQ8IZY5 108 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 OR52E4Q8NGH9 312 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 PPCDCQ96CD2 204 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 ZNHIT6Q9NWK9 470 aaKnown RBP0.52□□□□□ -2.33
PMS1-203ENST00000409593 ALPK2Q86TB3 2170 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 TMEM94Q12767 1356 aa0.52□□□□□ -2.33
PMS1-203ENST00000409593 RP1P56715 2156 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 LOC100506127A0A0U1RQW1 187 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 IVLP07476 585 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 AKR1C1Q04828 323 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 Q3ZCU0 254 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 DNAL1Q4LDG9 190 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 C9orf163Q8N9P6 203 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 TMEM109Q9BVC6 243 aa0.51□□□□□ -2.33
PMS1-203ENST00000409593 PCYT1BQ9Y5K3 369 aaPredicted RBP0.51□□□□□ -2.33
PMS1-203ENST00000409593 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 PTPRSQ13332 1948 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 TMEM269A0A1B0GVZ9 245 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 MEIS3P1A6NDR6 274 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 GEMIN2O14893 280 aaKnown RBP0.5□□□□□ -2.33
PMS1-203ENST00000409593 S100A9P06702 114 aaKnown RBP0.5□□□□□ -2.33
PMS1-203ENST00000409593 TFPTP0C1Z6 253 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 RASSF6Q6ZTQ3 369 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 SPATA24Q86W54 205 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 GPHB5Q86YW7 130 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 OR10D3Q8NH80 312 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 RAB2BQ8WUD1 216 aa0.5□□□□□ -2.33
PMS1-203ENST00000409593 FABP5Q01469 135 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 FAM45BPQ6NSW5 357 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 RPP25LQ8N5L8 163 aaKnown RBP0.49□□□□□ -2.33
PMS1-203ENST00000409593 OR5AK3PQ8NH89 298 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 RBP7Q96R05 134 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 CHST6Q9GZX3 395 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 CD300AQ9UGN4 299 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 SIPA1L1O43166 1804 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 FLT4P35916 1363 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 DICER1Q9UPY3 1922 aaKnown RBP0.49□□□□□ -2.33
PMS1-203ENST00000409593 TMED7-TICAM2A0A0A6YYA0 188 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 AZIN1O14977 448 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 ATP8B1O43520 1251 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 UBBP0CG47 229 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 CXCL2P19875 107 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 CXCL3P19876 107 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 KDELR2P33947 212 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 SLCO1A2P46721 670 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 ZNHIT3Q15649 155 aaPredicted RBP0.49□□□□□ -2.33
PMS1-203ENST00000409593 C4orf26Q17RF5 130 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 COPS6Q7L5N1 327 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 UMODL1-AS1Q8N2C9 162 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 SPERTQ8NA61 448 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 ACOT12Q8WYK0 555 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 TESCQ96BS2 214 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 ABCC12Q96J65 1359 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 LAMB4A4D0S4 1761 aa0.49□□□□□ -2.33
PMS1-203ENST00000409593 NUP160Q12769 1436 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 IBA57-AS1B1ANH7 110 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 ATP6V1G2O95670 118 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 MIPP30301 263 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 FKBP1AP62942 108 aaKnown RBP0.48□□□□□ -2.33
PMS1-203ENST00000409593 PLPPR5Q32ZL2 321 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 GREB1Q4ZG55 1949 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 THSD7AQ9UPZ6 1657 aa0.48□□□□□ -2.33
PMS1-203ENST00000409593 REREQ9P2R6 1566 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 NUP153P49790 1475 aaKnown RBP0.47□□□□□ -2.33
PMS1-203ENST00000409593 SCAF11Q99590 1463 aaKnown RBP0.47□□□□□ -2.33
PMS1-203ENST00000409593 BRI3O95415 125 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 MSNP26038 577 aaKnown RBP0.47□□□□□ -2.33
PMS1-203ENST00000409593 RPL30P62888 115 aaKnown RBP0.47□□□□□ -2.33
PMS1-203ENST00000409593 ACSM3Q53FZ2 586 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 SAPCD1Q5SSQ6 148 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 SLC22A24Q8N4F4 322 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 OR8B3Q8NGG8 313 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 NSRP1Q9H0G5 558 aaKnown RBP0.47□□□□□ -2.33
PMS1-203ENST00000409593 CFAP45Q9UL16 551 aa0.47□□□□□ -2.33
PMS1-203ENST00000409593 RD3LP0DJH9 198 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 JOSD1Q15040 202 aaPredicted RBP0.46□□□□□ -2.34
PMS1-203ENST00000409593 HLA-DRB5Q30154 266 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.46□□□□□ -2.34
PMS1-203ENST00000409593 MRPL57Q9BQC6 102 aaKnown RBP0.46□□□□□ -2.34
PMS1-203ENST00000409593 C1orf109Q9NX04 203 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 SETD5Q9C0A6 1442 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.46□□□□□ -2.34
PMS1-203ENST00000409593 C5orf49A4QMS7 147 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 STX10O60499 249 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 HLA-DRB3P79483 266 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 CDK10Q15131 360 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 C10orf55Q5SWW7 151 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms