RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 NPIPB11E5RHQ5 1161 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 ST8SIA3O43173 380 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 SCGB1D2O95969 90 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 APOC3P02656 99 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 SCTP09683 121 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 HLA-DRB3P79483 266 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 BTN1A1Q13410 526 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 ZNF273Q14593 569 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 FAM76BQ5HYJ3 339 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 MOB1BQ7L9L4 216 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 TBC1D26Q86UD7 250 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 FAM219AQ8IW50 185 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 IL22RA2Q969J5 263 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 SSX3Q99909 188 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 POLDIP2Q9Y2S7 368 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 BORCS7-ASMTA0A0B4J1R7 106 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 IGKV1-6A0A0C4DH72 117 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 DEGS1O15121 323 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 CD28P10747 220 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 MUC1P15941 1255 aaPredicted RBP10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 UCP1P25874 307 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 Q6P435 159 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 WDR82Q6UXN9 313 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 SLC35G3Q8N808 338 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 BEND2Q8NDZ0 799 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 C8orf46Q8TAG6 207 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 C11orf1Q9H5F2 150 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 PARP11Q9NR21 331 aa10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 UBE2J1Q9Y385 318 aaPredicted RBP10.24□□□□□ -0.77
CHRNA1-205ENST00000409542 TMEM210A6NLX4 147 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ADARB2-AS1A8MUL3 147 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 H0Y980 276 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 NDUFB3O43676 98 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 CHST1O43916 411 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ATG12O94817 140 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ACAA1P09110 424 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 RCC1P18754 421 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 UBE2E1P51965 193 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ERVK11-1P61568 191 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 HABP2Q14520 560 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 PXDC1Q5TGL8 231 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ZNF818PQ6ZRF7 136 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 H1FOOQ8IZA3 346 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 SELENOHQ8IZQ5 122 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 GAPTQ8N292 157 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 DMBX1Q8NFW5 382 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 OR52M1Q8NGK5 317 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 OR5D13Q8NGL4 314 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 SECTM1Q8WVN6 248 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 H1FXQ92522 213 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 NARS2Q96I59 477 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ZNF488Q96MN9 340 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 RCL1Q9Y2P8 373 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 CARHSP1Q9Y2V2 147 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 IGKV1D-13A0A0B4J2D9 117 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 HSPB6O14558 160 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 MED6O75586 246 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 SEC11BP0C7V7 166 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 PGA5P0DJD9 388 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 IGKV1-13P0DP09 117 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 S100GP29377 79 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 LPAR6P43657 344 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 CAV2P51636 162 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 DEFA5Q01523 94 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 GNMTQ14749 295 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 SPIN3Q5JUX0 258 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 STUMQ69YW2 141 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ATRAIDQ6UW56 229 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 BTNL8Q6UX41 500 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 ZNF695Q8IW36 515 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 CMTM1Q8IZ96 169 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 PIFOQ8TCI5 191 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 KIRREL1Q96J84 757 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 NRIP2Q9BQI9 281 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 GINS3Q9BRX5 216 aa10.23□□□□□ -0.77
CHRNA1-205ENST00000409542 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 K7EIL1 84 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 DNASE2O00115 360 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 CDIPTO14735 213 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 RHBDL1O75783 438 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 PVALBP20472 110 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 F2RL1P55085 397 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 NMSQ5H8A3 153 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 ZNF497Q6ZNH5 498 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 SVBPQ8N300 66 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 COMMD1Q8N668 190 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 OR4C13Q8NGP0 309 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 OR2T6Q8NHC8 308 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 LYPD6BQ8NI32 183 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 NKX6-2Q9C056 277 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 MEGF9Q9H1U4 602 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 FAM212BQ9NTI7 297 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms