RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 AKAP14Q86UN6 197 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 Q8N6K4 173 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 OR4C13Q8NGP0 309 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 GLYATL2Q8WU03 294 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 OR51J1Q9H342 316 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 FBXL15Q9H469 300 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 TCF21O43680 179 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 GPR137BO60478 399 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 KRASP01116 189 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 IGLV2-23P01705 113 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 SERPINE2P07093 398 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 UBA52P62987 128 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 AANATQ16613 207 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 ANKRD55Q3KP44 614 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 Q6ZS46 218 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 OR5R1Q8NH85 324 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 RBM14Q96PK6 669 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 PLSCR3Q9NRY6 295 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 JMJD1CQ15652 2540 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 C9orf170A2RU37 121 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 NBR2O15453 112 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 SFT2D2O95562 160 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 IFNA2P01563 188 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 SAA1P0DJI8 122 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 RRASP10301 218 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 TAS2R31P59538 309 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 BLCAPP62952 87 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 DHODHQ02127 395 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 PJVKQ0ZLH3 352 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 DHRS2Q13268 280 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 TMEM187Q14656 261 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 PLGLAQ15195 96 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 PSG5Q15238 335 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 TMEM177Q53S58 311 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 C9orf152Q5JTZ5 239 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 Q8N9W7 124 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 R3HDM4Q96D70 268 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 METTL1Q9UBP6 276 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 POMT1Q9Y6A1 747 aa11.23□□□□□ -0.61
CHRNA1-204ENST00000409323 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 TRAV3A0A0B4J244 114 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 FCN1O00602 326 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 CCNKO75909 580 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 OR2F2O95006 317 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 HPRT1P00492 218 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 AMY1AP04745 511 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 UCP1P25874 307 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 TMEM268Q5VZI3 342 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 LYG2Q86SG7 212 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 UXS1Q8NBZ7 420 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 RHOVQ96L33 236 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 TMEM222Q9H0R3 208 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 PITPNC1Q9UKF7 332 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 KCNIP3Q9Y2W7 256 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 NSG2Q9Y328 171 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 TNCP24821 2201 aa11.22□□□□□ -0.61
CHRNA1-204ENST00000409323 A0A0G2JRQ6 117 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 RRHO14718 337 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 HNRNPCP07910 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 SULT1A3P0DMM9 295 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 SULT1A4P0DMN0 295 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 MYOD1P15172 320 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 DHRS7BQ6IAN0 325 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 PRIMA1Q86XR5 153 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 ZNF695Q8IW36 515 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 SELENOHQ8IZQ5 122 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 TCTE3Q8IZS6 198 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 C5orf56Q8N8D9 126 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 OSR1Q8TAX0 266 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 GALNT14Q96FL9 552 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 PLEKHA2Q9HB19 425 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 GPN1Q9HCN4 374 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 KIAA1456Q9P272 454 aa11.21□□□□□ -0.61
CHRNA1-204ENST00000409323 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 RBFOX2O43251 390 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 AKR1C2P52895 323 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 GNB1P62873 340 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OR4A47Q6IF82 309 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 LYZL2Q7Z4W2 148 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 FAM71E2Q8N5Q1 922 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 TSNAXQ99598 290 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 MED28Q9H204 178 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 TMEM140Q9NV12 185 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 NDUFA3O95167 84 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 CDS2O95674 445 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms