RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 PLET1Q6UQ28 207 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 LINC00596Q86U02 117 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 C15orf40Q8WUR7 153 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 SMIM4Q8WVI0 70 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 CLCC1Q96S66 551 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 C7orf50Q9BRJ6 194 aaKnown RBP9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 ZNF355PQ9NSJ1 428 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 IL36GQ9NZH8 169 aa9.66□□□□□ -0.86
CHRNA1-203ENST00000409219 A0A0G2JLM5 398 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 A0A1W2PP11 408 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 H3BUA1 57 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 CD2P06729 351 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 IGFBP3P17936 291 aaPredicted RBP9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 RAB3AP20336 220 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 MRPS10P82664 201 aaKnown RBP9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 TNFRSF9Q07011 255 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 RPEL1Q2QD12 228 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 HES5Q5TA89 166 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 C5orf24Q7Z6I8 188 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 LYG2Q86SG7 212 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 GAPTQ8N292 157 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 TSEN15Q8WW01 171 aaKnown RBP9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 RCC2Q9P258 522 aaKnown RBP9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 PEF1Q9UBV8 284 aaKnown RBP9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 STEAP1Q9UHE8 339 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 JPT1Q9UK76 154 aa9.65□□□□□ -0.87
CHRNA1-203ENST00000409219 FAM240BA0A1B0GVZ2 78 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 HLA-DMAP28067 261 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 GPR176Q14439 515 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 TATDN3Q17R31 274 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 ZNF57Q68EA5 555 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 ZNF343Q6P1L6 599 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 ZNF562Q6V9R5 426 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 GLDNQ6ZMI3 551 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 GRPEL2Q8TAA5 225 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 MRPS24Q96EL2 167 aaKnown RBP9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 S100A16Q96FQ6 103 aaKnown RBP9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 CYYR1Q96J86 154 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 METTL9Q9H1A3 318 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
CHRNA1-203ENST00000409219 SLC17A2O00624 439 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 EIF2B2P49770 351 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 PRR20EP86478 221 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 PRR20CP86479 221 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 PRR20DP86480 221 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 PRR20BP86481 221 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 PRR20AP86496 221 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 TRAT1Q6PIZ9 186 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 OR5T1Q8NG75 326 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 OR6F1Q8NGZ6 308 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 TAS2R4Q9NYW5 299 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 CKLFQ9UBR5 152 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 ING4Q9UNL4 249 aa9.63□□□□□ -0.87
CHRNA1-203ENST00000409219 A0A0B4J293 547 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 OR5H14A6NHG9 310 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 H0YJW9 148 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 GABARAPH6UMI1 98 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 NDUFB8O95169 186 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 MAS1P04201 325 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 BTCP35070 178 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 CLDN12P56749 244 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 SSBP2P81877 361 aaPredicted RBP9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 KLF9Q13886 244 aaPredicted RBP9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 GLT8D1Q68CQ7 371 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 FAM71F2Q6NXP2 309 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 WFDC3Q8IUB2 231 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 TOMM5Q8N4H5 51 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 BVESQ8NE79 360 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 PARP12Q9H0J9 701 aaKnown RBP9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 ZC4H2Q9NQZ6 224 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 MBNL3Q9NUK0 354 aaKnown RBP9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 COPZ2Q9P299 210 aa9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 RBMX2Q9Y388 322 aaKnown RBP9.62□□□□□ -0.87
CHRNA1-203ENST00000409219 MSGN1A6NI15 193 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 CENPXA8MT69 81 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 MCRIP1C9JLW8 97 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 YPEL1O60688 119 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 CCNKO75909 580 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 GSTP1P09211 210 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 CD3GP09693 182 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 EDN2P20800 178 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 AADACP22760 399 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 FXYD3Q14802 87 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 PSG5Q15238 335 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 RAB11BQ15907 218 aa9.61□□□□□ -0.87
CHRNA1-203ENST00000409219 DEFB114Q30KQ6 69 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms