RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SRFP11831 508 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 KIR2DL2P43627 348 aaPredicted RBP15.08■□□□□ 0
SMPD4-202ENST00000409031 GUSBP11Q6P575 273 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 RNASEH2CQ8TDP1 164 aaKnown RBP15.08■□□□□ 0
SMPD4-202ENST00000409031 RASL11BQ9BPW5 248 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 FOXL1Q12952 345 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 TNXAQ16473 311 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 MRPL32Q9BYC8 188 aaKnown RBP15.07■□□□□ 0
SMPD4-202ENST00000409031 LPAR2Q9HBW0 351 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 LRRC37AA6NMS7 1700 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 LYZL6O75951 148 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 UMODP07911 640 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 CKS2P33552 79 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 SCARF2Q96GP6 870 aaPredicted RBP15.07■□□□□ 0
SMPD4-202ENST00000409031 DERL1Q9BUN8 251 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 UNC13CQ8NB66 2214 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 RND2P52198 227 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 FOXA3P55318 350 aaPredicted RBP15.07■□□□□ 0
SMPD4-202ENST00000409031 RPL30P62888 115 aaKnown RBP15.07■□□□□ 0
SMPD4-202ENST00000409031 MUC15Q8N387 334 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 ORAOV1Q8WV07 137 aa15.07■□□□□ 0
SMPD4-202ENST00000409031 C1QTNF9BB2RNN3 333 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 ATP5IP56385 69 aaPredicted RBP15.06■□□□□ 0
SMPD4-202ENST00000409031 UBE2V1Q13404 147 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 OR10J3Q5JRS4 329 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 SLC25A40Q8TBP6 338 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 TIMD4Q96H15 378 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 HIST1H4GQ99525 98 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 SBF2Q86WG5 1849 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 RGPD3A6NKT7 1758 aaPredicted RBP15.06■□□□□ 0
SMPD4-202ENST00000409031 RGPD4Q7Z3J3 1758 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 ODAMA1E959 279 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 NDUFS8O00217 210 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 GLRX2Q9NS18 164 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 PLA2G3Q9NZ20 509 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 JKAMPQ9P055 326 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
SMPD4-202ENST00000409031 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 MGST3O14880 152 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 GNB1LQ9BYB4 327 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 SEMA5BQ9P283 1151 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 TP53BP1Q12888 1972 aaPredicted RBP15.06■□□□□ 0
SMPD4-202ENST00000409031 TMSB15BA0A087X1C1 80 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 RBPJQ06330 500 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 TFF3Q07654 80 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 RPEQ96AT9 228 aa15.06■□□□□ 0
SMPD4-202ENST00000409031 SCN2AQ99250 2005 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 A0A0A6YYD4 124 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 GPR183P32249 361 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 CALHM1Q8IU99 346 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 ABHD12Q8N2K0 398 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 HIGD1AQ9Y241 93 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 SHANK3Q9BYB0 1731 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 ZADH2Q8N4Q0 377 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 C5orf30Q96GV9 206 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 DMRTA2Q96SC8 542 aa15.05■□□□□ 0
SMPD4-202ENST00000409031 IZUMO1RA6ND01 250 aa15.05■□□□□ -0
SMPD4-202ENST00000409031 IL6RP08887 468 aaPredicted RBP15.05■□□□□ -0
SMPD4-202ENST00000409031 DLX1P56177 255 aa15.05■□□□□ -0
SMPD4-202ENST00000409031 NAPSAO96009 420 aa15.05■□□□□ -0
SMPD4-202ENST00000409031 TTC32Q5I0X7 151 aa15.05■□□□□ -0
SMPD4-202ENST00000409031 SPEM1Q8N4L4 309 aa15.05■□□□□ -0
SMPD4-202ENST00000409031 SNHG12Q9BXW3 62 aa15.05■□□□□ -0
SMPD4-202ENST00000409031 F11RQ9Y624 299 aaKnown RBP15.05■□□□□ -0
SMPD4-202ENST00000409031 SOX21Q9Y651 276 aaPredicted RBP15.05■□□□□ -0
SMPD4-202ENST00000409031 IGHV1OR15-9A0A0B4J2B8 117 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 IGKV1-9A0A0C4DH69 117 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 TMEM189A5PLL7 270 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 CCL1P22362 96 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 TNFAIP6P98066 277 aaPredicted RBP15.04■□□□□ -0
SMPD4-202ENST00000409031 TBR1Q16650 682 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 ACTL10Q5JWF8 245 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.04■□□□□ -0
SMPD4-202ENST00000409031 MEGF9Q9H1U4 602 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 A0A1W2PQF6 199 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 PRDX2P32119 198 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 HOXA4Q00056 320 aaPredicted RBP15.04■□□□□ -0
SMPD4-202ENST00000409031 PAPPA2Q9BXP8 1791 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 RRHO14718 337 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 SSPNQ14714 243 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 Q5PR19 223 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 DLL1O00548 723 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 COX5BP10606 129 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 TPRX1Q8N7U7 411 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 TMEM74BQ9NUR3 256 aa15.04■□□□□ -0
SMPD4-202ENST00000409031 PRRX1P54821 245 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 ACSF3Q4G176 576 aaPredicted RBP15.03■□□□□ -0
SMPD4-202ENST00000409031 TEX38Q6PEX7 206 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 C1orf174Q8IYL3 243 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 SCNM1Q9BWG6 230 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 NYNRINQ9P2P1 1898 aaKnown RBP15.03■□□□□ -0
SMPD4-202ENST00000409031 ATXN7O15265 892 aaPredicted RBP15.03■□□□□ -0
SMPD4-202ENST00000409031 MT-CO3P00414 261 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 FAM222BQ8WU58 562 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 TIMP4Q99727 224 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 SIPA1L1O43166 1804 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 IGKV1D-8A0A087WSZ0 117 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 LINC01565O15544 149 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 NUDT10Q8NFP7 164 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 ZNF414Q96IQ9 312 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms