RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 F2RL2O00254 374 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 RBFOX2O43251 390 aaKnown RBP eCLIP10.66□□□□□ -0.72e-7■■■■■ 33.6
SMARCB1-203ENST00000407082 ZNF737O75373 536 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 HPRT1P00492 218 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 LHBP01229 141 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 IFNA1P01562 189 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 HSPB1P04792 205 aaKnown RBP10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 OR4A8P0C604 315 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 PAX1P15863 534 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 TNFRSF1AP19438 455 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 ERVK-16P61578 105 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 EIF4EBP1Q13541 118 aaPredicted RBP10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 LRRC75BQ2VPJ9 315 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 KHDC3LQ587J8 217 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 SOHLH1Q5JUK2 328 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 THNSL2Q86YJ6 484 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 CD177Q8N6Q3 437 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 C15orf54Q8N8G6 183 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 GPHA2Q96T91 129 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 MRPL37Q9BZE1 423 aaKnown RBP10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 GNG12Q9UBI6 72 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 MLXQ9UH92 298 aa10.66□□□□□ -0.7
SMARCB1-203ENST00000407082 IGHV3-64DA0A0J9YX35 117 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 FAM74A7A6NL05 159 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 FAM157AC9JC47 383 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 C15orf65H3BRN8 121 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 NUPL2O15504 423 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 NDUFS6O75380 124 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 TMEM50AO95807 157 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 IAPPP10997 89 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 TNFAIP6P98066 277 aaPredicted RBP10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 ADIPOQQ15848 244 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 FAM74A3Q4VXF1 159 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 SPANXN5Q5MJ07 72 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 Q6ZRM9 215 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 MOGAT3Q86VF5 341 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 MUC15Q8N387 334 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 ZNF525Q8N782 197 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 Q8TCH9 128 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 PARP12Q9H0J9 701 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 RBKSQ9H477 322 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 CDC42EP3Q9UKI2 254 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 FBXO7Q9Y3I1 522 aa10.65□□□□□ -0.7
SMARCB1-203ENST00000407082 KIAA2026Q5HYC2 2103 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 TRGV10A0A0A0MS01 117 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 C17orf112F2Z3M2 114 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 SPRY3O43610 288 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 P0C879 139 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 NPBWR1P48145 328 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 TMEM267Q0VDI3 215 aaPredicted RBP10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 PMS2P11Q13670 270 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 EDDM3AQ14507 147 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 MORN2Q502X0 79 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 ZNF506Q5JVG8 444 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 TMEM14EPQ6UXP3 125 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 LRP11Q86VZ4 500 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 OR10P1Q8NGE3 313 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 OR10A7Q8NGE5 316 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 OR10G4Q8NGN3 311 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 ITLN1Q8WWA0 313 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 MBD3L1Q8WWY6 194 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 SDSLQ96GA7 329 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 TMEM147Q9BVK8 224 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 EGLN1Q9GZT9 426 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 ZNF665Q9H7R5 613 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 PSG11Q9UQ72 335 aa10.64□□□□□ -0.71
SMARCB1-203ENST00000407082 CR1P17927 2039 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 IGKV1D-17A0A075B6S4 117 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 NKX6-3A6NJ46 265 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 ZNF729A6NN14 1252 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 M0R036 132 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 PPIHO43447 177 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 NXPH3O95157 252 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 KRASP01116 189 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 SOD3P08294 240 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 METTL15P1P0C7V9 234 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 CTRB1P17538 263 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 G6PCP35575 357 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 CDKN1AP38936 164 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 Q3ZCU0 254 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 RNF212Q495C1 297 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 TMEM41BQ5BJD5 291 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 AVPI1Q5T686 147 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 CTRB2Q6GPI1 263 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 ODF3L1Q8IXM7 274 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 C1orf87Q8N0U7 546 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 ZNF709Q8N972 641 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 OR52E5Q8NH55 327 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 UBALD1Q8TB05 177 aa10.63□□□□□ -0.71
SMARCB1-203ENST00000407082 DTD1Q8TEA8 209 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms