RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 CCSO14618 274 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 IGHV4-59P01825 116 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 APOA2P02652 100 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 IL5P05113 134 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
GPC3-203ENST00000406757 SERPINE2P07093 398 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 HOXB5P09067 269 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 G6PCP35575 357 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 F2RL1P55085 397 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 AWAT1Q58HT5 328 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 TMEM268Q5VZI3 342 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 FAM71F2Q6NXP2 309 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 LYZL2Q7Z4W2 148 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 TMEM219Q86XT9 240 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 OR8H3Q8N146 312 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 SIGLECL1Q8N7X8 197 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 MINDY2Q8NBR6 621 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 OR5AN1Q8NGI8 311 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 PIFOQ8TCI5 191 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 ZNF431Q8TF32 576 aaPredicted RBP6.68□□□□□ -1.34
GPC3-203ENST00000406757 ADTRPQ96IZ2 230 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 EAF1Q96JC9 268 aaPredicted RBP6.68□□□□□ -1.34
GPC3-203ENST00000406757 ALX4Q9H161 411 aaPredicted RBP6.68□□□□□ -1.34
GPC3-203ENST00000406757 MEGF9Q9H1U4 602 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 PRELID3BQ9Y3B1 194 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 WASHC3Q9Y3C0 194 aa6.68□□□□□ -1.34
GPC3-203ENST00000406757 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 TRAV3A0A0B4J244 114 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 A0A0G2JRQ6 117 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 SH2D7A6NKC9 451 aaPredicted RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 OOSP1A8MZH6 123 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 SHOXO15266 292 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 ADAP1O75689 374 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 SIX6O95475 246 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 KRASP01116 189 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 FBP1P09467 338 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 ANXA3P12429 323 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 TMEM11P17152 192 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 UCP1P25874 307 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 CD1BP29016 333 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 BRS3P32247 399 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 RTL8BQ17RB0 113 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 LRRC75BQ2VPJ9 315 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 CCDC144NLQ6NUI1 221 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 ZNF695Q8IW36 515 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 FAM219AQ8IW50 185 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 C12orf45Q8N5I9 185 aaPredicted RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 FLYWCH2Q96CP2 140 aaKnown RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 WDR89Q96FK6 387 aaPredicted RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 GALNT14Q96FL9 552 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 JMJD8Q96S16 334 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 CLCC1Q96S66 551 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 TMEM222Q9H0R3 208 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 OR51J1Q9H342 316 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 GPN1Q9HCN4 374 aaPredicted RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 ESM1Q9NQ30 184 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 LIN7CQ9NUP9 197 aaKnown RBP6.67□□□□□ -1.34
GPC3-203ENST00000406757 NSG2Q9Y328 171 aa6.67□□□□□ -1.34
GPC3-203ENST00000406757 C13orf42A0A1B0GVH6 325 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 FAM90A9PA6NNJ1 464 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 NCBP2LA6PVI3 153 aaKnown RBP6.66□□□□□ -1.34
GPC3-203ENST00000406757 MPTX1A8MV57 137 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 FAM25EA8MYX2 175 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 HOXA3O43365 443 aaPredicted RBP6.66□□□□□ -1.34
GPC3-203ENST00000406757 TXNL1O43396 289 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 SSNA1O43805 119 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 CREBL2O60519 120 aaPredicted RBP6.66□□□□□ -1.34
GPC3-203ENST00000406757 PRAF2O60831 178 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 NXPH3O95157 252 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 CDS2O95674 445 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 HPRT1P00492 218 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 MOSP00540 346 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 IGKV1-5P01602 117 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 IGLV2-23P01705 113 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 OR9G9P0C7N8 305 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 MYOD1P15172 320 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 MC5RP33032 325 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 KIR2DS2P43631 304 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 RAG2P55895 527 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 BPIFB3P59826 476 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 TNP2Q05952 138 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 PSG5Q15238 335 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 FCN2Q15485 313 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 TMEM177Q53S58 311 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 Q6YL49 198 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 C9orf139Q6ZV77 190 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 PDPNQ86YL7 162 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 LGI3Q8N145 548 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 TEX29Q8N6K0 151 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 SLC35G3Q8N808 338 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 DMBX1Q8NFW5 382 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 OR2T10Q8NGZ9 312 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 OR4S2Q8NH73 311 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 COQ8AQ8NI60 647 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 RNASE11Q8TAA1 199 aaKnown RBP6.66□□□□□ -1.34
GPC3-203ENST00000406757 MITD1Q8WV92 249 aa6.66□□□□□ -1.34
GPC3-203ENST00000406757 TAF15Q92804 592 aaKnown RBP eCLIP6.66□□□□□ -1.349e-12■■■□□ 16.7
GPC3-203ENST00000406757 GPR146Q96CH1 333 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms