RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
DUSP28-202ENST00000405954 RNASE7Q9H1E1 156 aaKnown RBP11.91□□□□□ -0.5
DUSP28-202ENST00000405954 OR2D2Q9H210 308 aa11.91□□□□□ -0.5
DUSP28-202ENST00000405954 COL6A3P12111 3177 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 MS4A18H0YCH9 400 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 LEPROTL1O95214 131 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 WISP1O95388 367 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 ADH4P08319 380 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
DUSP28-202ENST00000405954 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
DUSP28-202ENST00000405954 MS4A18Q3C1V0 323 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 TM4SF20Q53R12 229 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 OR1L3Q8NH93 324 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 SSMEM1Q8WWF3 244 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 CER1O95813 267 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 GPM6AP51674 278 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 TM4SF19Q96DZ7 209 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 GUCD1Q96NT3 240 aa11.9□□□□□ -0.5
DUSP28-202ENST00000405954 H0Y980 276 aa11.9□□□□□ -0.51
DUSP28-202ENST00000405954 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.51
DUSP28-202ENST00000405954 CD5LO43866 347 aa11.9□□□□□ -0.51
DUSP28-202ENST00000405954 CA3P07451 260 aa11.9□□□□□ -0.51
DUSP28-202ENST00000405954 SPSB1Q96BD6 273 aa11.9□□□□□ -0.51
DUSP28-202ENST00000405954 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 DRD1P21728 446 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 NHLRC2Q8NBF2 726 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 TRIB1Q96RU8 372 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 METTL7AQ9H8H3 244 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 SLC17A4Q9Y2C5 497 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 PTPRSQ13332 1948 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 HELTA6NFD8 242 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 SSTR5P35346 364 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 RHOGP84095 191 aa11.89□□□□□ -0.51
DUSP28-202ENST00000405954 HEYLQ9NQ87 328 aaPredicted RBP11.89□□□□□ -0.51
DUSP28-202ENST00000405954 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 TIAF1O95411 115 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 NPPCP23582 126 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 RPL8P62917 257 aaKnown RBP11.88□□□□□ -0.51
DUSP28-202ENST00000405954 OR10J3Q5JRS4 329 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 SERTM2A0A1B0GWG4 89 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
DUSP28-202ENST00000405954 FASLGP48023 281 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 TMEM211Q6ICI0 200 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 DEFB119Q8N690 84 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 ZNF611Q8N823 705 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 RALYQ9UKM9 306 aaKnown RBP11.88□□□□□ -0.51
DUSP28-202ENST00000405954 G3V4G9 280 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 CNIH1O95406 144 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 NTSR1P30989 418 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 Q6ZRM9 215 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 MKXQ8IYA7 352 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 ZIC4Q8N9L1 334 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 MAP1LC3CQ9BXW4 147 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 AKIRIN1Q9H9L7 192 aaPredicted RBP11.88□□□□□ -0.51
DUSP28-202ENST00000405954 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
DUSP28-202ENST00000405954 TSSC4Q9Y5U2 329 aaPredicted RBP11.88□□□□□ -0.51
DUSP28-202ENST00000405954 SDK2Q58EX2 2172 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 CXorf51AA0A1B0GTR3 108 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 AMY1AP04745 511 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 LINC00310P59036 64 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 HSD52Q0P140 79 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 OR10G3Q8NGC4 313 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
DUSP28-202ENST00000405954 ULBP2Q9BZM5 246 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 TRAPPC2LQ9UL33 140 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 AHRRA9YTQ3 701 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 TNFSF15O95150 251 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 RPS20P60866 119 aaKnown RBP11.87□□□□□ -0.51
DUSP28-202ENST00000405954 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 NPCDR1Q9BY65 106 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
DUSP28-202ENST00000405954 MEF2CQ06413 473 aaPredicted RBP11.87□□□□□ -0.51
DUSP28-202ENST00000405954 LTC4SQ16873 150 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
DUSP28-202ENST00000405954 PATE4P0C8F1 98 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 COX19Q49B96 90 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
DUSP28-202ENST00000405954 TMEM116Q8NCL8 245 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
DUSP28-202ENST00000405954 IGHV3-20A0A0C4DH32 117 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 CLEC3BP05452 202 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 CELA3BP08861 270 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 COL9A1P20849 921 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 G6PCP35575 357 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 HHEXQ03014 270 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 RUNX3Q13761 415 aa11.86□□□□□ -0.51
DUSP28-202ENST00000405954 IBA57Q5T440 356 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms