RNA–Protein interactions for RNA: ENST00000404127.6

ARHGAP4-205, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 3,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-205	ENST00000404127	SH2D1B	O14796	132 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	WISP2	O76076	250 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	DUSP3	P51452	185 aa	Predicted RBP	13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	OR1C1	Q15619	314 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SPATA31B1P	Q5VZV4	182 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	KCNIP4	Q6PIL6	250 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	NINJ1	Q92982	152 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ACY3	Q96HD9	319 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ZDHHC11	Q9H8X9	412 aa		13.83	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ARR3	P36575	388 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	OR5I1	Q13606	314 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ZNF645	Q8N7E2	425 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SLC25A40	Q8TBP6	338 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	FAM122A	Q96E09	287 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	FCGR3B	O75015	233 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MPV17	P39210	176 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MSMO1	Q15800	293 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	KIAA1644	Q3SXP7	199 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	COA6	Q5JTJ3	125 aa	Known RBP	13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ABHD17B	Q5VST6	288 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	OCC1	Q8TAD7	63 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	VN1R17P	Q8TDU5	208 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TMEM45B	Q96B21	275 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	HCFC1	P51610	2035 aa		13.82	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TRBV6-6	A0A0A6YYG2	114 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MARCH11	A6NNE9	402 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ACTL6B	O94805	426 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TFPI2	P48307	235 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	RPL15	P61313	204 aa	Known RBP	13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	C21orf62-AS1	Q17RA5	79 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	CISD2	Q8N5K1	135 aa	Known RBP	13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	OR13A1	Q8NGR1	328 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ANAPC16	Q96DE5	110 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	RTL8A	Q9BWD3	113 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SS18L1	O75177	396 aa	Predicted RBP	13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	FOXH1	O75593	365 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MYOD1	P15172	320 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	DCAF12	Q5T6F0	453 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ATP1A1-AS1	Q5TC04	95 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	IGKV3D-15	A0A087WSY6	115 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	CLDN14	O95500	239 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	CD1B	P29016	333 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PDLIM4	P50479	330 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	FABP6	P51161	128 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PSG7	Q13046	419 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SFRP2	Q96HF1	295 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	HINT2	Q9BX68	163 aa		13.81	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	C15orf62	A8K5M9	175 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	NTN3	O00634	580 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127		Q6ZWC4	215 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127		Q8N7P7	452 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	HEYL	Q9NQ87	328 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	HPRT1	P00492	218 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	WNT2	P09544	360 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	COX5B	P10606	129 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	KITLG	P21583	273 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	COQ2	Q96H96	371 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	HSPB9	Q9BQS6	159 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TP53TG3	Q9ULZ0	132 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	RNF114	Q9Y508	228 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PLCE1	Q9P212	2302 aa		13.8	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127		F6UZH7	168 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TCL1A	P56279	114 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ERVFC1-1	P60608	527 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ARG2	P78540	354 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ZNF90	Q03938	601 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SEPSECS	Q9HD40	501 aa	Known RBP	13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MBNL3	Q9NUK0	354 aa	Known RBP	13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127		M0R143	59 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SERF1A	O75920	110 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	IRF2	P14316	349 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	IER3	P46695	156 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	RPL39P5	Q59GN2	51 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	FAM173A	Q9BQD7	235 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	STRADB	Q9C0K7	418 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PARD6A	Q9NPB6	346 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ELOVL5	Q9NYP7	299 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PXMP4	Q9Y6I8	212 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	NPS	P0C0P6	89 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	DNLZ	Q5SXM8	178 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	CMTM2	Q8TAZ6	248 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	LINC00470	Q9BZP3	86 aa		13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.79	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MDFIC2	A0A1B0GVS7	189 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	SRP14	P37108	136 aa	Known RBP	13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	PKIB	Q9C010	78 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MS4A5	Q9H3V2	200 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	RYDEN	Q9NUL5	291 aa	Known RBP	13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	FOXJ2	Q9P0K8	574 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	ERVK11-1	P61568	191 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	LINC00596	Q86U02	117 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	R3HDM4	Q96D70	268 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	TIMM9	Q9Y5J7	89 aa		13.78	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	RNF212B	A8MTL3	300 aa		13.77	□□□□□ -0.2
ARHGAP4-205	ENST00000404127	MLNR	O43193	412 aa		13.77	□□□□□ -0.2

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