RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 OR10P1Q8NGE3 313 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 PHOSPHO2Q8TCD6 241 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 RAB2BQ8WUD1 216 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 GNPNAT1Q96EK6 184 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 BTF3L4Q96K17 158 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 TRIM4Q9C037 500 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 NKX6-2Q9C056 277 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 DCSTAMPQ9H295 470 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 C16orf95Q9H693 158 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 VPREB3Q9UKI3 123 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 COQ4Q9Y3A0 265 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 PRELID3BQ9Y3B1 194 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 HSPE1-MOB4S4R3N1 261 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 COL5A1P20908 1838 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 SHANK3Q9BYB0 1731 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 PLXNB1O43157 2135 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 NCOA1Q15788 1441 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 MYO5BQ9ULV0 1848 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 A0A087WUJ7 227 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 G3V3Q6 166 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 BHLHE40O14503 412 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 COX7A2LO14548 114 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 TP53I11O14683 189 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 NOS1APO75052 506 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 IGHV3-30-3P0DP02 117 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 FGF6P10767 208 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 SLC25A16P16260 332 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 NPPCP23582 126 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 CRYBB3P26998 211 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 MAGEA12P43365 314 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 TSPEAR-AS2P59090 65 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 LIN52Q52LA3 116 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 HACD4Q5VWC8 232 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 AMTNQ6UX39 209 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 SDIM1Q6ZPB5 146 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 PXT1Q8NFP0 134 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR11H1Q8NG94 326 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR10A6Q8NH74 314 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 SFRP2Q96HF1 295 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 CNBD2Q96M20 576 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 PPP1R2P1Q96PQ5 205 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 PHB2Q99623 299 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 MGLLQ99685 303 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 SIGMAR1Q99720 223 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 CMSS1Q9BQ75 279 aaKnown RBP1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 ULBP3Q9BZM4 244 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 GPR84Q9NQS5 396 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 CMTM6Q9NX76 183 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 DOK5Q9P104 306 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 SAMHD1Q9Y3Z3 626 aaKnown RBP1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 MMACHCQ9Y4U1 282 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 ARL5AQ9Y689 179 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 MINOS1-NBL1R4GNA1 71 aa1.76□□□□□ -2.13
HMGB1P17-201ENST00000403495 CCDC144AA2RUR9 1427 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 DCCP43146 1447 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 PTPRJQ12913 1337 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 C19orf71A6NCJ1 209 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 E5RI56 91 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 UBE2L6O14933 153 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 TTRP02766 147 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 CST2P09228 141 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 CBR1P16152 277 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 HIST1H1TP22492 207 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 GNG10P50151 68 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 TBPL1P62380 186 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 HIST1H3AP68431 136 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 H3F3AP84243 136 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 TNFAIP6P98066 277 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 CAV1Q03135 178 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 LPCAT3Q6P1A2 487 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 GLT6D1Q7Z4J2 308 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 C20orf196Q8IYI0 205 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 SLC22A24Q8N4F4 322 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 PACRGLQ8N7B6 248 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 DAND5Q8N907 189 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR10X1Q8NGY0 326 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 FNDC9Q8TBE3 224 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 AP3S1Q92572 193 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 KLK6Q92876 244 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 BORCS7Q96B45 105 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 C20orf166-AS1Q96NR2 134 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 UPK3BQ9BT76 320 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 KIFC1Q9BW19 673 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 MND1Q9BWT6 205 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 AICDAQ9GZX7 198 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 C11orf1Q9H5F2 150 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 MRPL27Q9P0M9 148 aaKnown RBP1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 AK3Q9UIJ7 227 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 ANGPT4Q9Y264 503 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 PCF11O94913 1555 aaKnown RBP1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 COL18A1P39060 1754 aa1.75□□□□□ -2.13
HMGB1P17-201ENST00000403495 WRNQ14191 1432 aaPredicted RBP eCLIP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 LCTP09848 1927 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 DHRS12A0PJE2 317 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 KNCNA6PVL3 124 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR11H12B2RN74 326 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 C9JCJ5 164 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms