RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	AP4S1	Q9Y587	144 aa		5.11	□□□□□ -1.59
CEACAM1-208	ENST00000403461	PEX16	Q9Y5Y5	336 aa		5.11	□□□□□ -1.59
CEACAM1-208	ENST00000403461	DNAH1	Q9P2D7	4330 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SACS	Q9NZJ4	4579 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SAA2-SAA4	A0A096LPE2	208 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	NUPR2	A6NF83	97 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	AIRE	O43918	545 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	YPEL1	O60688	119 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CA2	P00918	260 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SAA2	P0DJI9	122 aa	Predicted RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	RCC1	P18754	421 aa	Predicted RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	FUT3	P21217	361 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	POLR2I	P36954	125 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	OR3A3	P47888	321 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	LGALS7	P47929	136 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SYNJ2BP	P57105	145 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SNRPG	P62308	76 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	ADARB1	P78563	741 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	KLF5	Q13887	457 aa	Predicted RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GNMT	Q14749	295 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	RPEL1	Q2QD12	228 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CCDC58	Q4VC31	144 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	LY6G6F	Q5SQ64	297 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	RPL22L1	Q6P5R6	122 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GLIPR1L1	Q6UWM5	242 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	ZNF562	Q6V9R5	426 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	JAGN1	Q8N5M9	183 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	LFNG	Q8NES3	379 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GRPEL2	Q8TAA5	225 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	DYNLRB2	Q8TF09	96 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	TMEM68	Q96MH6	324 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	YPEL2	Q96QA6	119 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CLCC1	Q96S66	551 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	ABHD1	Q96SE0	405 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	TSNAX	Q99598	290 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	ZNF184	Q99676	751 aa	Predicted RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	FAM103A1	Q9BTL3	118 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	HIPK2	Q9H2X6	1198 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	PLEKHA3	Q9HB20	300 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SIGLEC8	Q9NYZ4	499 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	ZNF581	Q9P0T4	197 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	METTL1	Q9UBP6	276 aa	Known RBP	5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	WASHC3	Q9Y3C0	194 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	FBXO7	Q9Y3I1	522 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GMPPB	Q9Y5P6	360 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	NUBP2	Q9Y5Y2	271 aa		5.1	□□□□□ -1.59
CEACAM1-208	ENST00000403461	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	TRAV34	A0A0B4J273	112 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	LINC00854	A0A1B0GVQ3	168 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461		E9PI62	339 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	PDCD6	O75340	191 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GPX5	O75715	221 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CRTAP	O75718	401 aa	Predicted RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	OR2A4	O95047	310 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	APOA2	P02652	100 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CAPG	P40121	348 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	IRF3	Q14653	427 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	FXYD3	Q14802	87 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	C1orf146	Q5VVC0	180 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	TMPRSS11A	Q6ZMR5	421 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SLC16A13	Q7RTY0	426 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	ODF3L1	Q8IXM7	274 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GAPT	Q8N292	157 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SETD6	Q8TBK2	473 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	IL1F10	Q8WWZ1	152 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	THRSP	Q92748	146 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	GHSR	Q92847	366 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	RBMXL1	Q96E39	390 aa	Known RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CENPN	Q96H22	339 aa	Predicted RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	USMG5	Q96IX5	58 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	NEDD4L	Q96PU5	975 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	TXN2	Q99757	166 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	NEURL2	Q9BR09	285 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	SELENOI	Q9C0D9	397 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	IFI27L2	Q9H2X8	130 aa		5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	PEF1	Q9UBV8	284 aa	Known RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	RPL36	Q9Y3U8	105 aa	Known RBP	5.09	□□□□□ -1.59
CEACAM1-208	ENST00000403461	HYDIN	Q4G0P3	5121 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461		H0YJW9	148 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	FCN1	O00602	326 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	PAGE4	O60829	102 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SC5D	O75845	299 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MGMT	P16455	207 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MYL12A	P19105	171 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MAP2K4	P45985	399 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MED21	Q13503	144 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MED22	Q15528	200 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GUCA2B	Q16661	112 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	RPL39P5	Q59GN2	51 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DMKN	Q6E0U4	476 aa	Predicted RBP	5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GLDN	Q6ZMI3	551 aa	Predicted RBP	5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MOB1B	Q7L9L4	216 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	OR5T1	Q8NG75	326 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MRPL30	Q8TCC3	161 aa	Known RBP	5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ST6GALNAC5	Q9BVH7	336 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SRD5A3	Q9H8P0	318 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SCPEP1	Q9HB40	452 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAB2	Q9UQC2	676 aa		5.08	□□□□□ -1.6
CEACAM1-208	ENST00000403461	KLK5	Q9Y337	293 aa	Predicted RBP	5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms