RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 CFDP00746 253 aaPredicted RBP12.11□□□□□ -0.47
GABPA-202ENST00000400075 LINC00869P0C866 280 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 SLC31A2O15432 143 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 FCGR2BP31994 310 aaPredicted RBP12.11□□□□□ -0.47
GABPA-202ENST00000400075 BPIFA4PQ86YQ2 179 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 CADM3Q8N126 398 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 TMEM14DPA8MWL7 114 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 IGHV3-11P01762 117 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 WNT2P09544 360 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 CD1BP29016 333 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 RAB9AP51151 201 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 MIDNQ504T8 468 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 SIGLEC5O15389 551 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 WNT5AP41221 380 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 TCF19Q9Y242 345 aa12.11□□□□□ -0.47
GABPA-202ENST00000400075 AP4M1O00189 453 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 GATCO43716 136 aaKnown RBP12.1□□□□□ -0.47
GABPA-202ENST00000400075 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
GABPA-202ENST00000400075 Q6ZNX1 250 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 FBXL7Q9UJT9 491 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
GABPA-202ENST00000400075 GAS1P54826 345 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 TMEM222Q9H0R3 208 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
GABPA-202ENST00000400075 C1QL2Q7Z5L3 287 aa12.1□□□□□ -0.47
GABPA-202ENST00000400075 ZNF430Q9H8G1 570 aaPredicted RBP12.1□□□□□ -0.47
GABPA-202ENST00000400075 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 FAM181BA6NEQ2 426 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 ADIPOQQ15848 244 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 Q71RC1 249 aaPredicted RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 C5orf17Q8NAS9 161 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 GPHA2Q96T91 129 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 ABCA2Q9BZC7 2435 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 PQLC2LA1A4F0 135 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 S1PR2O95136 353 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 RPL7P18124 248 aaKnown RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 CD24P25063 80 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 CEACAM8P31997 349 aaPredicted RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 MYPOPQ86VE0 399 aaPredicted RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 A0A0G2JK05 382 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 HELTA6NFD8 242 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 E7EQL1 145 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 TMEM178BH3BS89 294 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 RANP62826 216 aaKnown RBP12.09□□□□□ -0.47
GABPA-202ENST00000400075 SIP14410 1827 aa12.09□□□□□ -0.47
GABPA-202ENST00000400075 A0A1B0GTI1 187 aa12.08□□□□□ -0.47
GABPA-202ENST00000400075 RAB19A4D1S5 217 aa12.08□□□□□ -0.47
GABPA-202ENST00000400075 PTBP3O95758 552 aaKnown RBP12.08□□□□□ -0.47
GABPA-202ENST00000400075 FABP9Q0Z7S8 132 aa12.08□□□□□ -0.47
GABPA-202ENST00000400075 SRRM5B3KS81 715 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 ZNF737O75373 536 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 COL8A1P27658 744 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 MIXL1Q9H2W2 232 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 GOLT1BQ9Y3E0 138 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 NBR2O15453 112 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 CLPSP04118 112 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 SNRPCP09234 159 aaKnown RBP12.08□□□□□ -0.48
GABPA-202ENST00000400075 TSPOP30536 169 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 BRD3OSQ6XYD6 125 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 CLEC9AQ6UXN8 241 aa12.08□□□□□ -0.48
GABPA-202ENST00000400075 MRPL20Q9BYC9 149 aaKnown RBP12.08□□□□□ -0.48
GABPA-202ENST00000400075 A0A1B0GVG6 124 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 PLAUP00749 431 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 OR4A47Q6IF82 309 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 KIAA2026Q5HYC2 2103 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 DEFB121Q5J5C9 76 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 FAM162BQ5T6X4 162 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 ASPHD2Q6ICH7 369 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 MARVELD1Q9BSK0 173 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 A0A1W2PPQ1 181 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
GABPA-202ENST00000400075 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.48
GABPA-202ENST00000400075 TMEM255AQ5JRV8 349 aa12.07□□□□□ -0.48
GABPA-202ENST00000400075 PAQR4Q8N4S7 273 aaPredicted RBP12.07□□□□□ -0.48
GABPA-202ENST00000400075 H3BUX3 64 aa12.06□□□□□ -0.48
GABPA-202ENST00000400075 FAM157CP0CG43 387 aa12.06□□□□□ -0.48
GABPA-202ENST00000400075 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms