RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 DEFB125Q8N687 156 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF645Q8N7E2 425 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 VSTM5A8MXK1 200 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 KLF7O75840 302 aaPredicted RBP8.52□□□□□ -1.05
PTPRM-203ENST00000400060 CNIH1O95406 144 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 AZU1P20160 251 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 GNB2P62879 340 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 QRFPP83859 136 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 PIGYQ3MUY2 71 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 DOLPP1Q86YN1 238 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 OBP2BQ9NPH6 170 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 H3BVH4 76 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
PTPRM-203ENST00000400060 REG1BP48304 166 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 OR1K1Q8NGR3 316 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 ST6GALNAC6Q969X2 333 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 PRNDQ9UKY0 176 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 ZSWIM8A7E2V4 1837 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 MYO7AQ13402 2215 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 A0A1W2PP11 408 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 ZNF788Q6ZQV5 615 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 FOXL2P58012 376 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 CX3CL1P78423 397 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 Q6AWC8 147 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 THYN1Q9P016 225 aa8.52□□□□□ -1.05
PTPRM-203ENST00000400060 PPIAL4EA0A075B759 164 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 TRAV38-1A0A0B4J264 116 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 A0A1B0GX78 115 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 A0A1W2PS18 150 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 NGFP01138 241 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 PPIAL4FP0DN26 164 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SLC25A47Q6Q0C1 308 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 RPS19BP1Q86WX3 136 aaKnown RBP8.51□□□□□ -1.05
PTPRM-203ENST00000400060 OR13C6PQ8NH95 151 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 YPEL4Q96NS1 127 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 ZNF319Q9P2F9 582 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 PPIAL4AQ9Y536 164 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 CCDC88CQ9P219 2028 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 CISD3P0C7P0 127 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 ATP5G3P48201 142 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SHISA6Q6ZSJ9 500 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 RPEQ96AT9 228 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SF3B5Q9BWJ5 86 aaKnown RBP8.51□□□□□ -1.05
PTPRM-203ENST00000400060 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 PRR32B1ATL7 298 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SPINK8P0C7L1 97 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SMIM10L1P0DMW3 83 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 RPL15P61313 204 aaKnown RBP8.51□□□□□ -1.05
PTPRM-203ENST00000400060 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 GAGE2EQ4V326 116 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 C10orf113Q5VZT2 155 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 RHBDD2Q6NTF9 364 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SCGB1D4Q6XE38 83 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 LYG1Q8N1E2 194 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SMIM10Q96HG1 83 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 GAGE2DQ9UEU5 116 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 MMP17Q9ULZ9 603 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SDK1Q7Z5N4 2213 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SIVA1O15304 175 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 LAMTOR5O43504 91 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 CXCL12P48061 93 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SFTPA2Q8IWL1 248 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 SFTPA1Q8IWL2 248 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 FGF21Q9NSA1 209 aa8.51□□□□□ -1.05
PTPRM-203ENST00000400060 CD27P26842 260 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 MESP2Q0VG99 397 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 BMPERQ8N8U9 685 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 PAXXQ9BUH6 204 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 SCN8AQ9UQD0 1980 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 G3V4G9 280 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 C8orf88P0DMB2 117 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 PAX1P15863 534 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 FOLR3P41439 243 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 MEF2CQ06413 473 aaPredicted RBP8.5□□□□□ -1.05
PTPRM-203ENST00000400060 KIR3DS1Q14943 382 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 FGFRL1Q8N441 504 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 UBALD1Q8TB05 177 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 HES4Q9HCC6 221 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 F5P12259 2224 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 FAM231BA6NCW3 169 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 GZMHP20718 246 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 FXYD3Q14802 87 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 ADAMTSL5Q6ZMM2 481 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 CNTRLQ7Z7A1 2325 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 OR4F17Q8NGA8 305 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 SSMEM1Q8WWF3 244 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 FOXB1Q99853 325 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms