RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SLC24A4Q8NFF2 622 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 BPIFB3P59826 476 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
SCAF4-202ENST00000399804 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 DNASE2O00115 360 aaPredicted RBP11.74□□□□□ -0.53
SCAF4-202ENST00000399804 KIAA0141Q14154 515 aaPredicted RBP11.74□□□□□ -0.53
SCAF4-202ENST00000399804 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 CYYR1Q96J86 154 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
SCAF4-202ENST00000399804 RALYQ9UKM9 306 aaKnown RBP11.74□□□□□ -0.53
SCAF4-202ENST00000399804 SERF2P84101 59 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 MMDQ15546 238 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCAF4-202ENST00000399804 ZNF596Q8TC21 504 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 TAF15Q92804 592 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCAF4-202ENST00000399804 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
SCAF4-202ENST00000399804 SMIM8Q96KF7 97 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 DVL1O14640 695 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
SCAF4-202ENST00000399804 B2MP61769 119 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 RHOBP62745 196 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 HERPUD1Q15011 391 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 IGF2-ASQ6U949 168 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 CABLES2Q9BTV7 478 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 SEC11CQ9BY50 192 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 GAB2Q9UQC2 676 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 RAMP3O60896 148 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 RBP4P02753 201 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 LRTM2Q8N967 370 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 OR9G1Q8NH87 305 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 SSX3Q99909 188 aa11.73□□□□□ -0.53
SCAF4-202ENST00000399804 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 MORN2Q502X0 79 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 FAM78BQ5VT40 261 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 ACSM6Q6P461 480 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 Q6ZR03 302 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 WDR86Q86TI4 376 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 GNB4Q9HAV0 340 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 SLC25A17O43808 307 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
SCAF4-202ENST00000399804 LIME1Q9H400 295 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
SCAF4-202ENST00000399804 DBX1A6NMT0 343 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 CEACAM18A8MTB9 384 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 MC5RP33032 325 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
SCAF4-202ENST00000399804 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 TEPPQ6URK8 271 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 FAM169BQ8N8A8 192 aa11.72□□□□□ -0.53
SCAF4-202ENST00000399804 DANCRP0C864 163 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 CEACAM8P31997 349 aaPredicted RBP11.71□□□□□ -0.53
SCAF4-202ENST00000399804 COQ2Q96H96 371 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 DOCK11Q5JSL3 2073 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 TM4SF5O14894 197 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 CEACAM4O75871 244 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 TIGITQ495A1 244 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 C15orf54Q8N8G6 183 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 NPVFQ9HCQ7 196 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.53
SCAF4-202ENST00000399804 YPEL1O60688 119 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 ORM2P19652 201 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 ID3Q02535 119 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 AWAT1Q58HT5 328 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 YPEL2Q96QA6 119 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 DKK4Q9UBT3 224 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 TLNRD1Q9H1K6 362 aa11.71□□□□□ -0.54
SCAF4-202ENST00000399804 NOTCH2Q04721 2471 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 KBTBD11O94819 623 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 RD3LP0DJH9 198 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 SLC35E3Q7Z769 313 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 SSC4DQ8WTU2 575 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 MIOXQ9UGB7 285 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 LINC00312Q9Y6C7 94 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 IGKV1D-17A0A075B6S4 117 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 TRBV6-6A0A0A6YYG2 114 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 PPP5D1E7EU14 171 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 ARG1P05089 322 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 PRB3Q04118 309 aaPredicted RBP11.7□□□□□ -0.54
SCAF4-202ENST00000399804 ISOC2Q96AB3 205 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 PAGE4O60829 102 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 ADIPOQQ15848 244 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 TMEM30BQ3MIR4 351 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 LDLRAD3Q86YD5 345 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 OR4P4Q8NGL7 312 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 TRIOO75962 3097 aa11.7□□□□□ -0.54
SCAF4-202ENST00000399804 C7orf77A4D0Y5 90 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 UBE2G1P62253 170 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
SCAF4-202ENST00000399804 Q6ZS49 121 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms