RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 FAM90A14PP0C7W9 464 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 LILRA1O75019 489 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 LHX2P50458 406 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 SONP18583 2426 aaKnown RBP7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FOXI3A8MTJ6 420 aaPredicted RBP7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 RTN4RL2Q86UN3 420 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 DCTN5Q9BTE1 182 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FGF20Q9NP95 211 aaPredicted RBP7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 LTN1O94822 1766 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 ATP5L2Q7Z4Y8 100 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 RPL8P62917 257 aaKnown RBP7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 MRC1P22897 1456 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 APOHP02749 345 aaPredicted RBP7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 ARL14EPLP0DKL9 152 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 FLG2Q5D862 2391 aaPredicted RBP7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 PPIAL4EA0A075B759 164 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 PPIAL4FP0DN26 164 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 TSPAN7P41732 249 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 ADAMTSL4Q6UY14 1074 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 RTN4RQ9BZR6 473 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 RPP21Q9H633 154 aaKnown RBP7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 PPIAL4AQ9Y536 164 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 NALCNQ8IZF0 1738 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 DNAJC25-GNG10A0A024R161 153 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 GAGE7O76087 117 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 GAGE12FP0CL80 117 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 GAGE12GP0CL81 117 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 GAGE12IP0CL82 117 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 C18orf15Q96N68 181 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 HOXB1P14653 301 aaPredicted RBP7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 PRTN3P24158 256 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.21
CACNA1C-220ENST00000399655 ZAR1LA6NP61 321 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 AHRRA9YTQ3 701 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 PLPP3O14495 311 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 NPPCP23582 126 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 FGF9P31371 208 aaPredicted RBP7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 SPATA46Q5T0L3 261 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 CLEC2AQ6UVW9 174 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 SLIT3O75094 1523 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 XRN1Q8IZH2 1706 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 WFDC9Q8NEX5 89 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 COQ2Q96H96 371 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 NABP2Q9BQ15 211 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 IL18BPO95998 194 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 ZNF117Q03924 483 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 MRGPRFQ96AM1 343 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 MS4A8Q9BY19 250 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 IFT172Q9UG01 1749 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 RGPD1P0DJD0 1748 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 GJB5O95377 273 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 DRD3P35462 400 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 CLDN10P78369 228 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 EWSR1Q01844 656 aaKnown RBP eCLIP7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 ZAR1Q86SH2 424 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 CHTOPQ9Y3Y2 248 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 GLRX5Q86SX6 157 aa7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-220ENST00000399655 PPYP01298 95 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 FUT5Q11128 374 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 C4orf45Q96LM5 186 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 ALKBH3Q96Q83 286 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 WNT10AQ9GZT5 417 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 ELNP15502 786 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 TAF15Q92804 592 aaKnown RBP eCLIP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 RLFQ13129 1914 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 TRGV5A0A0B4J1U4 118 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 TCRBV5S4A2TA0A5A2 114 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 IGKCP01834 107 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 NBL1P41271 181 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 NEGR1Q7Z3B1 354 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 ASCL2Q99929 193 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 ADARB2-AS1A8MUL3 147 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 ZNF658BQ4V348 819 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 GTSCR1Q86UQ5 136 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 MARS2Q96GW9 593 aaKnown RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 UBE2BP63146 152 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 DHHO43323 396 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 CD28P10747 220 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 CD68P34810 354 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 PPICP45877 212 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 PGLYRP3Q96LB9 341 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 FOXB1Q99853 325 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 DEFB127Q9H1M4 99 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 MED1Q15648 1581 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 CD300EQ496F6 205 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 LRP10Q7Z4F1 713 aa7.45□□□□□ -1.22
CACNA1C-220ENST00000399655 LILRA5A6NI73 299 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 M0R381 172 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 IGHG4P01861 327 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 TMEM25Q86YD3 366 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 ATOH1Q92858 354 aaPredicted RBP7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 TNFRSF19Q9NS68 423 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 RPL27AP46776 148 aaKnown RBP7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 LIM2P55344 173 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms