RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SAA1P0DJI8 122 aaPredicted RBP9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 KIR2DS2P43631 304 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LGALS7P47929 136 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PROK1P58294 105 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PJVKQ0ZLH3 352 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ASAH1Q13510 395 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TSNAXQ99598 290 aaKnown RBP9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PRSS22Q9GZN4 317 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 METTL1Q9UBP6 276 aaKnown RBP9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 MMP24Q9Y5R2 645 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TNCP24821 2201 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CRYM-AS1A6NIL9 109 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 H0Y980 276 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 NDUFB6O95139 128 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 IGHG2P01859 326 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 HLA-DRB1P01911 266 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SLC6A1P30531 599 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LPAR6P43657 344 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 COMPP49747 757 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 KRTAP10-3P60369 221 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 UBE2KP61086 200 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 POU2AF1Q16633 256 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SP6Q3SY56 376 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 AWAT1Q58HT5 328 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PUSL1Q8N0Z8 303 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TCTEX1D1Q8N7M0 179 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 OR4F5Q8NH21 305 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 WIPF2Q8TF74 440 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RASL11BQ9BPW5 248 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SLC25A21Q9BQT8 299 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 WNT10AQ9GZT5 417 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 NAA60Q9H7X0 242 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PLEKHA2Q9HB19 425 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 FAM212BQ9NTI7 297 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 FLVCR2Q9UPI3 526 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 C14orf166Q9Y224 244 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 FBXO7Q9Y3I1 522 aa9.8□□□□□ -0.84
HLA-DQB1-203ENST00000399082 C3orf85A0A1B0GTC6 90 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ARPC1BO15143 372 aaKnown RBP9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 HPRT1P00492 218 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CA2P00918 260 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 IL6RP08887 468 aaPredicted RBP9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 OR5AC1P0C628 307 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 UCP1P25874 307 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 FOXL1Q12952 345 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CBX3Q13185 183 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RBMS2Q15434 407 aaKnown RBP9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 C9orf152Q5JTZ5 239 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CCDC71LQ8N9Z2 235 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LHFPL5Q8TAF8 219 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RHOVQ96L33 236 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CLCC1Q96S66 551 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 COMMD9Q9P000 198 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 KIAA1456Q9P272 454 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 COPZ2Q9P299 210 aa9.79□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TRAV3A0A0B4J244 114 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CENPXA8MT69 81 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 EGR2P11161 476 aaPredicted RBP9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RPA2P15927 270 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TAS2R31P59538 309 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CX3CL1P78423 397 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 DHODHQ02127 395 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PRSS8Q16651 343 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 VMA21Q3ZAQ7 101 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LIN54Q6MZP7 749 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 C10orf99Q6UWK7 81 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SSX9Q7RTT3 188 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SLC35E3Q7Z769 313 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TMED4Q7Z7H5 227 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TEX45Q8NA69 505 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 OR2T6Q8NHC8 308 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TMEM167AQ8TBQ9 72 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CD300LFQ8TDQ1 290 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 GLYATL2Q8WU03 294 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 GALNT14Q96FL9 552 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SEC22AQ96IW7 307 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ZNF430Q9H8G1 570 aaPredicted RBP9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 BEX1Q9HBH7 125 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PRR13Q9NZ81 148 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LINC00527Q9UJ94 153 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RNF114Q9Y508 228 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ANK2Q01484 3957 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 A0A1B0GW64 132 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 MARCH11A6NNE9 402 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ATP6V0E1O15342 81 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 KBTBD11O94819 623 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 IGKV1-5P01602 117 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 P0C879 139 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 MYOD1P15172 320 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 NQO2P16083 231 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 AKR1C4P17516 323 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 S100GP29377 79 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 G6PCP35575 357 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 VDAC2P45880 294 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms