RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 PDCD6O75340 191 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 IGKV1-13P0DP09 117 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 C9orf135Q5VTT2 229 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 ACSM6Q6P461 480 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 VHLLQ6RSH7 139 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 MCEMP1Q8IX19 187 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 MDS2Q8NDY4 140 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 OR10V1Q8NGI7 309 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 CORO2AQ92828 525 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 SPSB1Q96BD6 273 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 ABHD17AQ96GS6 310 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 TAAR6Q96RI8 345 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 TIMM9Q9Y5J7 89 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 SHANK1Q9Y566 2161 aa8.54□□□□□ -1.04
HMGCLL1-205ENST00000398661 VPS13CQ709C8 3753 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 TRAV30A0A087WSZ9 112 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 UBE2L5PA0A1B0GUS4 154 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 SLC22A20A6NK97 555 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 SH2D1BO14796 132 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 SYNGR2O43760 224 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 SLC25A6P12236 298 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 CBLN1P23435 193 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 Q0VG73 95 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 ASCL4Q6XD76 172 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 SVIPQ8NHG7 77 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 CSTL1Q9H114 145 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 ZNF442Q9H7R0 627 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 SEPSECSQ9HD40 501 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 IGKV1-12A0A0C4DH73 117 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 TMPRSS2O15393 492 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 IGKV1D-12P01611 117 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 GPX1P07203 203 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 TNFSF4P23510 183 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 RPL19P84098 196 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 GGNQ86UU5 652 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 OR10D3Q8NH80 312 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 RNF24Q9Y225 148 aa8.53□□□□□ -1.04
HMGCLL1-205ENST00000398661 IGLV3-32A0A0A0MS00 114 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 MDFIC2A0A1B0GVS7 189 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 ZNF891A8MT65 544 aaPredicted RBP8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 C11orf94C9JXX5 98 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 NPIPA2E9PIF3 369 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 NPIPA3F8WFD2 350 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 TRAF3IP2O43734 574 aaPredicted RBP8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 CIDEAO60543 219 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 S100A7P31151 101 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 MAJINQ3KP22 176 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 Q6ZRM9 215 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 KLHDC1Q8N7A1 406 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 OR10G9Q8NGN4 311 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 OR10G7Q8NGN6 311 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 OR5P3Q8WZ94 311 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 SFRP2Q96HF1 295 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 FAM173AQ9BQD7 235 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 SLC35D1Q9NTN3 355 aa8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 MRPS16Q9Y3D3 137 aaKnown RBP8.52□□□□□ -1.04
HMGCLL1-205ENST00000398661 ABCA4P78363 2273 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 A0A1W2PR80 420 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 PGLYRP1O75594 196 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 EGR1P18146 543 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 TSPOP30536 169 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 GNB1P62873 340 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 CNN3Q15417 329 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 RSPO1Q2MKA7 263 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 PRR30Q53SZ7 412 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 PHYHD1Q5SRE7 291 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 SAXO1Q8IYX7 474 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 ABI3Q9P2A4 366 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
HMGCLL1-205ENST00000398661 TMEM238C9JI98 176 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 WDR1O75083 606 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 ZNF253O75346 499 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 CD46P15529 392 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 KITLGP21583 273 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 GFRA1P56159 465 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 CARD18P57730 90 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 SLC38A11Q08AI6 406 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 OCIAD2Q56VL3 154 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 TCTEX1D1Q8N7M0 179 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 BORCS8Q96FH0 119 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 CST9LQ9H4G1 147 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 SPRR3Q9UBC9 169 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 CACNG5Q9UF02 275 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 BOKQ9UMX3 212 aaPredicted RBP8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 TBL2Q9Y4P3 447 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 PKDREJQ9NTG1 2253 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 ZNF462Q96JM2 2506 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 PGPEP1LA6NFU8 196 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 CD300LBA8K4G0 201 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 RBFOX2O43251 390 aaKnown RBP eCLIP8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 NAPSAO96009 420 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 CRYAAP02489 173 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 SCTP09683 121 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 PATE4P0C8F1 98 aa8.51□□□□□ -1.05
HMGCLL1-205ENST00000398661 F2RP25116 425 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms