RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SRSF7Q16629 238 aaKnown RBP eCLIP2.35□□□□□ -2.03
CHD9-202ENST00000398510 MORN3Q6PF18 240 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 SLC25A34Q6PIV7 304 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 OR5T1Q8NG75 326 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TMEM158Q8WZ71 300 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ARHGAP5-AS1Q96IT6 56 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 METTL1Q9UBP6 276 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 LAMTOR2Q9Y2Q5 125 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TRAV8-6A0A0B4J262 113 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CTXND1A0A1B0GTU2 59 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 RAMP3O60896 148 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 FBXO24O75426 580 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 NEURL1O76050 574 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 RBM11P57052 281 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 PLAURQ03405 335 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 BSPH1Q075Z2 132 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 KLF9Q13886 244 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 LDLRAD2Q5SZI1 272 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 FAM90A2PQ658T7 463 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 FCRLBQ6BAA4 426 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 LIMS2Q7Z4I7 341 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 C6orf201Q7Z4U5 140 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 OR4B1Q8NGF8 309 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 SGMS2Q8NHU3 365 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 LHFPL5Q8TAF8 219 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF488Q96MN9 340 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 MAP1LC3AQ9H492 121 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PLAC1Q9HBJ0 212 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TMEM74BQ9NUR3 256 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PILRAQ9UKJ1 303 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 ATXN7O15265 892 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 CNTFRP26992 372 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PPIFP30405 207 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 CDKN2AP42771 156 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 FUT5Q11128 374 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 MESTQ5EB52 335 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 NCMAPQ5T1S8 102 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 SH2D5Q6ZV89 423 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZFP62Q8NB50 900 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 DTD1Q8TEA8 209 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PEF1Q9UBV8 284 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 KBTBD11O94819 623 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PPYP01298 95 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ORMDL2Q53FV1 153 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 UNQ6494/PRO21346Q6UXR6 183 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 MOGAT3Q86VF5 341 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 OR2C3Q8N628 320 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 C8orf44Q96CB5 159 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF71Q9NQZ8 489 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 KLK11Q9UBX7 282 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CCL27Q9Y4X3 112 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 C3orf80F5H4A9 247 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 IFI27P40305 119 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 AMER3Q8N944 861 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PPP1R1CQ8WVI7 109 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 SYT11Q9BT88 431 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 GSX2Q9BZM3 304 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 K7EMI3 77 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ICMTO60725 284 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF737O75373 536 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CTAG2O75638 210 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CISD3P0C7P0 127 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TBR1Q16650 682 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 SPATA46Q5T0L3 261 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 MBNL2Q5VZF2 373 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 TMEM42Q69YG0 159 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF774Q6NX45 483 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 RASL11AQ6T310 242 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 MYPOPQ86VE0 399 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZIC5Q96T25 663 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 DPM3Q9P2X0 92 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TRGV2A0A075B6R0 118 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 H3BSH0 61 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 M6PRP20645 277 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 RPS11P62280 158 aaKnown RBP eCLIP2.34□□□□□ -2.03
CHD9-202ENST00000398510 VAX1Q5SQQ9 334 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 IGFL3Q6UXB1 125 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 C3orf56Q8N813 242 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 PTPMT1Q8WUK0 201 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 ATP6V0BQ99437 205 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 PSMG3Q9BT73 122 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 ZNF703Q9H7S9 590 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 PCSK5Q92824 1860 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 TGIF2-C20orf24A0A0A6YYL0 155 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 H3BMM0 161 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 M0R2Z0 102 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 ALX3O95076 343 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 COX7A1P24310 79 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 RPS19P39019 145 aaKnown RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 OPRL1P41146 370 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 DYNLT3P51808 116 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 FOXA1P55317 472 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 SUMO2P61956 95 aaKnown RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 BVESQ8NE79 360 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 NUDCD2Q8WVJ2 157 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 PLPPR2Q96GM1 343 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms