RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CX3CL1P78423 397 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
PUM3-202ENST00000397885 UFSP1Q6NVU6 142 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 BHLHA15Q7RTS1 189 aaPredicted RBP9.7□□□□□ -0.86
PUM3-202ENST00000397885 MMD2Q8IY49 270 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 ZNF439Q8NDP4 499 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 RCHY1Q96PM5 261 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 LRRC61Q9BV99 259 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 CACNG5Q9UF02 275 aa9.7□□□□□ -0.86
PUM3-202ENST00000397885 NCOR2Q9Y618 2525 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 TRBV20OR9-2A0A075B6H5 130 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 IGKV3D-11A0A0A0MRZ8 115 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 KIR2DS1A0A191URI9 304 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 SAP30O75446 220 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 NUDT3O95989 172 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 OR10J4P0C629 311 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 KIR2DS4P43632 304 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 SCGB2A2Q13296 93 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 KIR2DS1Q14954 304 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 IGFBP7Q16270 282 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 SPANXN5Q5MJ07 72 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 Q6ZRM9 215 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 RDH5Q92781 318 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 SARAFQ96BY9 339 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 DERL1Q9BUN8 251 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 ZNF442Q9H7R0 627 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 CCL28Q9NRJ3 127 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 DNAH14Q0VDD8 3507 aa9.69□□□□□ -0.86
PUM3-202ENST00000397885 CNOT1A5YKK6 2376 aaKnown RBP9.69□□□□□ -0.86
PUM3-202ENST00000397885 COL5A1P20908 1838 aaPredicted RBP9.69□□□□□ -0.86
PUM3-202ENST00000397885 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 SPRY1O43609 319 aaPredicted RBP9.68□□□□□ -0.86
PUM3-202ENST00000397885 VAMP5O95183 116 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 GDF1P27539 372 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 GPR6P46095 362 aaPredicted RBP9.68□□□□□ -0.86
PUM3-202ENST00000397885 ATP5G3P48201 142 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 MYBPHQ13203 477 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 PIGYQ3MUY2 71 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 CHRNA10Q9GZZ6 450 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 GPR27Q9NS67 375 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 LOC102724200A0A096LPH7 203 aaPredicted RBP9.68□□□□□ -0.86
PUM3-202ENST00000397885 IGKV1D-13A0A0B4J2D9 117 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 TRAPPC2LH3BP13 241 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 IGKV1-13P0DP09 117 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 SPINK2P20155 84 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 CDAP32320 146 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 RBM11P57052 281 aaKnown RBP9.68□□□□□ -0.86
PUM3-202ENST00000397885 UBE2G1P62253 170 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 VWC2Q2TAL6 325 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 ATOH7Q8N100 152 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 ST6GALNAC3Q8NDV1 305 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 GJC3Q8NFK1 279 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 OR1B1Q8NGR6 318 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 SAP25Q8TEE9 199 aa9.68□□□□□ -0.86
PUM3-202ENST00000397885 C5orf63A6NC05 138 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 FAM181BA6NEQ2 426 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 DKK1O94907 266 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 CRYAAP02489 173 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 PPIAL4GP0DN37 164 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 FUT6P51993 359 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 BRICD5Q6PL45 260 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 WFDC8Q8IUA0 241 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 BORCS8Q96FH0 119 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 NPCDR1Q9BY65 106 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 TMEM38BQ9NVV0 291 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 IGKV1-27A0A075B6S5 117 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 IGHV5-51A0A0C4DH38 117 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 PGPEP1LA6NFU8 196 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 C17orf51A8MQB3 221 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 CRXO43186 299 aaPredicted RBP9.67□□□□□ -0.86
PUM3-202ENST00000397885 EGR1P18146 543 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 SRIP30626 198 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 GUCA1AP43080 201 aaPredicted RBP9.67□□□□□ -0.86
PUM3-202ENST00000397885 DUSP3P51452 185 aaPredicted RBP9.67□□□□□ -0.86
PUM3-202ENST00000397885 SUMO3P55854 103 aaPredicted RBP9.67□□□□□ -0.86
PUM3-202ENST00000397885 MFAP5Q13361 173 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 MUC21Q5SSG8 566 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 NEUROG1Q92886 237 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 SPTBN2O15020 2390 aa9.67□□□□□ -0.86
PUM3-202ENST00000397885 TRAV8-6A0A0B4J262 113 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 J3QW42 95 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 BMPR1BO00238 502 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 AMY1AP04745 511 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 NPY1RP25929 384 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 GFERP55789 205 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 SEC11AP67812 179 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 PMP22Q01453 160 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
PUM3-202ENST00000397885 TGFBR3Q03167 851 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 PHYHD1Q5SRE7 291 aa9.66□□□□□ -0.86
PUM3-202ENST00000397885 C9orf135Q5VTT2 229 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms