RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 RPS16P62249 146 aaKnown RBP11.3□□□□□ -0.6
GAPDH-203ENST00000396858 HNF4GQ14541 408 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 C9orf139Q6ZV77 190 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 TEX29Q8N6K0 151 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
GAPDH-203ENST00000396858 RITA1Q96K30 269 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 TPSG1Q9NRR2 321 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
GAPDH-203ENST00000396858 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 HMX3A6NHT5 357 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 MOSP00540 346 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 IFNA21P01568 189 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 IGLV2-23P01705 113 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 P0C879 139 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 TRAPPC2P0DI81 140 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 TRAPPC2BP0DI82 140 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 NQO2P16083 231 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 TMEM11P17152 192 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 BRS3P32247 399 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 H2BFSP57053 126 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 BPIFB3P59826 476 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 OR2B8PP59922 312 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 MMDQ15546 238 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 CHAC2Q8WUX2 184 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 RHOVQ96L33 236 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 ZNF48Q96MX3 618 aaPredicted RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 GSX1Q9H4S2 264 aaPredicted RBP11.29□□□□□ -0.6
GAPDH-203ENST00000396858 CACNG5Q9UF02 275 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
GAPDH-203ENST00000396858 FAM90A9PA6NNJ1 464 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 H3BUX3 64 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 SLC25A17O43808 307 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 ATG12O94817 140 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 NXPH3O95157 252 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 HRASP01112 189 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 OR9G9P0C7N8 305 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 FOSL1P15407 271 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 VDAC1P21796 283 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 CD83Q01151 205 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 IAH1Q2TAA2 248 aaPredicted RBP11.28□□□□□ -0.6
GAPDH-203ENST00000396858 THOC7Q6I9Y2 204 aaKnown RBP11.28□□□□□ -0.6
GAPDH-203ENST00000396858 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 GSG1LQ6UXU4 331 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 Q8N6K4 173 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 OR2T10Q8NGZ9 312 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 GPR146Q96CH1 333 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 WDR89Q96FK6 387 aaPredicted RBP11.28□□□□□ -0.6
GAPDH-203ENST00000396858 OR10C1Q96KK4 312 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 SSX3Q99909 188 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 MEGF9Q9H1U4 602 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 NSG2Q9Y328 171 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
GAPDH-203ENST00000396858 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 SPDEFO95238 335 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 DYNLT3P51808 116 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 LY6EQ16553 131 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 VMA21Q3ZAQ7 101 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 AKAP14Q86UN6 197 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 TMEM219Q86XT9 240 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
GAPDH-203ENST00000396858 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
GAPDH-203ENST00000396858 SPIN2AQ99865 258 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 SPIN2BQ9BPZ2 258 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.61
GAPDH-203ENST00000396858 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
GAPDH-203ENST00000396858 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 NBR2O15453 112 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 KBTBD11O94819 623 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 SCGB1D2O95969 90 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 IGHV4-59P01825 116 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 UBE2KP61086 200 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 CD300CQ08708 224 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 EBI3Q14213 229 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 PSG5Q15238 335 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 Q6ZRM9 215 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
GAPDH-203ENST00000396858 SIGLECL1Q8N7X8 197 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
GAPDH-203ENST00000396858 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 ZDHHC16Q969W1 377 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 RANBP3Q9H6Z4 567 aaPredicted RBP11.26□□□□□ -0.61
GAPDH-203ENST00000396858 METTL1Q9UBP6 276 aaKnown RBP11.26□□□□□ -0.61
GAPDH-203ENST00000396858 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
GAPDH-203ENST00000396858 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms