RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TRAM1Q15629 374 aa13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 RAB11BQ15907 218 aa13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 GGTLC1Q9BX51 225 aa13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 CRYZL1O95825 349 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 PSMA1P25786 263 aaKnown RBP13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 DUTP33316 252 aaKnown RBP13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 DEFA5Q01523 94 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 CDK10Q15131 360 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 C15orf32Q32M92 178 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 OR4A47Q6IF82 309 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 PRSS48Q7RTY5 328 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 DDB2Q92466 427 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 ST6GALNAC5Q9BVH7 336 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
EXOSC3-202ENST00000396521 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 SLC22A5O76082 557 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 DHFRP00374 187 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 CBLN1P23435 193 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 ZNF45Q02386 682 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 MED22Q15528 200 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 FAM3DQ96BQ1 224 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 RAB3CQ96E17 227 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 RAB22AQ9UL26 194 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 TP53TG1Q9Y2A0 90 aa13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.3
EXOSC3-202ENST00000396521 HYDINQ4G0P3 5121 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 LY6G6CO95867 125 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 FCGR3AP08637 254 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 GADD45AP24522 165 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 C2orf76Q3KRA6 126 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 Q6ZS49 121 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 OR52B4Q8NGK2 314 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 UFD1Q92890 307 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 MARC2Q969Z3 335 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 MRPS7Q9Y2R9 242 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 PRELID3BQ9Y3B1 194 aa13.14□□□□□ -0.31
EXOSC3-202ENST00000396521 CXorf65A6NEN9 183 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 NPIPB5A8MRT5 1133 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 A8MWP6 167 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 OR2C1O95371 312 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 PRH1P02810 166 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 GSTT2P0CG29 244 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 MAS1LP35410 378 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 TNFRSF9Q07011 255 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 IRF3Q14653 427 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 ARL6IP1Q15041 203 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 IDO2Q6ZQW0 420 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 KLK5Q9Y337 293 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 AK6Q9Y3D8 172 aaKnown RBP13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
EXOSC3-202ENST00000396521 DPPA5A6NC42 116 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 MRPS14O60783 128 aaKnown RBP13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 OR2J3O76001 311 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 HSMCR30P0CW71 290 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 SAA1P0DJI8 122 aaPredicted RBP13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 BMI1P35226 326 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 KCTD21Q4G0X4 260 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 Q6ZWC4 215 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 ZNF367Q7RTV3 350 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 DCUN1D5Q9BTE7 237 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 FBXL7Q9UJT9 491 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
EXOSC3-202ENST00000396521 PPP5D1E7EU14 171 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 UBE2CO00762 179 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 CTXN2P0C2S0 81 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 TALDO1P37837 337 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 APOC4P55056 127 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 KLK9Q2XQG4 91 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 LIPKQ5VXJ0 399 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 ZNF773Q6PK81 442 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 H1FOOQ8IZA3 346 aaPredicted RBP13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 TMEM203Q969S6 136 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 C5orf30Q96GV9 206 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 GFI1Q99684 422 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 SLC2A9Q9NRM0 540 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 KLK9Q9UKQ9 250 aa13.11□□□□□ -0.31
EXOSC3-202ENST00000396521 V9GY05 133 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms