RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 MBP02144 154 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 SELLP14151 372 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 KIR2DS2P43631 304 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 RPL39P5Q59GN2 51 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 HEPN1Q6WQI6 88 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF788Q6ZQV5 615 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 Q8NA96 180 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 TVP23CQ96ET8 276 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 MAP1LC3B2A6NCE7 125 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 C15orf62A8K5M9 175 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 SPCS3P61009 180 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 CT45A1Q5HYN5 189 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 TEX36Q5VZQ5 186 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 C1orf229Q6ZS94 237 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 CT45A3Q8NHU0 189 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 GAFA1Q96PS6 74 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 MAP1LC3BQ9GZQ8 125 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 JKAMPQ9P055 326 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 TP53TG5Q9Y2B4 290 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 ATMQ13315 3056 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 SLC31A2O15432 143 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 OR2C1O95371 312 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 CYB5R3P00387 301 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 FAM90A2PQ658T7 463 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 ACSM6Q6P461 480 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 CA5BP1Q8WTZ4 195 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 CORO2AQ92828 525 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 S1PR3Q99500 378 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF835Q9Y2P0 537 aa12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 MAP1BP46821 2468 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-207ENST00000394801 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 TRGV10A0A0A0MS01 117 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 TRBV23-1A0A0A0MS06 115 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 FGF8P55075 233 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 ELLP55199 621 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 DLK1P80370 383 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 SSX8Q7RTT4 187 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 TCF23Q7RTU1 214 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 CISD2Q8N5K1 135 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 VAX2Q9UIW0 290 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 FGF7P21781 194 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 TAGLN2P37802 199 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 CEBPGP53567 150 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 RELBQ01201 579 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 NCMAPQ5T1S8 102 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 UTF1Q5T230 341 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF439Q8NDP4 499 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 DIRC2Q96SL1 478 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
UBE2D3-207ENST00000394801 HCFC1P51610 2035 aa12.65□□□□□ -0.39
UBE2D3-207ENST00000394801 DPRXA6NFQ7 191 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 IGHV3-7P01780 117 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 ERVK-16P61578 105 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 TMEM30BQ3MIR4 351 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 SPINK9Q5DT21 86 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 ACACAQ13085 2346 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 CXorf65A6NEN9 183 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 B4DEV8 164 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 IFNA1P01562 189 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 OR4S2Q8NH73 311 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 LHX4Q969G2 390 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 CCL13Q99616 98 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
UBE2D3-207ENST00000394801 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 THBDP07204 575 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 IRF2P14316 349 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 RAB11AP62491 216 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 ADIPOQQ15848 244 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 SSX9Q7RTT3 188 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 Q8N7P7 452 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 DEFB108BQ8NET1 73 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 DYSFO75923 2080 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 GYPAP02724 150 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 SAA2P0DJI9 122 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 TNFRSF1AP19438 455 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 THBS3P49746 956 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 TMPRSS3P57727 454 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 TFF3Q07654 80 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 PNRC1Q12796 327 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 ASCL5Q7RTU5 278 aa12.63□□□□□ -0.39
UBE2D3-207ENST00000394801 OR10G9Q8NGN4 311 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms