RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 TRGV3P03979 118 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 CCL3P10147 92 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM42Q69YG0 159 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 CALYQ9NYX4 217 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 ASB1Q9Y576 335 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 F8WEM9 126 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 OGG1O15527 345 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 HOXD3P31249 432 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM92Q6UXU6 159 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 RARRES2Q99969 163 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 KIAA1551Q9HCM1 1747 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 TRBV20OR9-2A0A075B6H5 130 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 A0A1B0GV72 72 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 FAM90A1Q86YD7 464 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 OR8D4Q8NGM9 314 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 SLC25A38Q96DW6 304 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 GGACTQ9BVM4 153 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 ALX4Q9H161 411 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 IGHV1-45A0A0A0MS14 117 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 VDAC2P45880 294 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 ACSF3Q4G176 576 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 GCSAMLQ5JQS6 135 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 LINC01555Q8NAE3 123 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 ABCA7Q8IZY2 2146 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 OR4C45A6NMZ5 311 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 HSPB1P04792 205 aaKnown RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 PIGYQ3MUY2 71 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 THSD4Q6ZMP0 1018 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 SPSB4Q96A44 273 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 PARP14Q460N5 1801 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 PSMB11A5LHX3 300 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 SMIM13P0DJ93 91 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 FSTP19883 344 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 ABHD12Q8N2K0 398 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 SHISA4Q96DD7 197 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 RCC2Q9P258 522 aaKnown RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 STRCP1A6NGW2 1772 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 HKR1P10072 659 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 TSPO2Q5TGU0 170 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 DMKNQ6E0U4 476 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 PLSCR2Q9NRY7 297 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 DUSP14O95147 198 aaKnown RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 IGF2P01344 180 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 HSPE1P61604 102 aaKnown RBP6.42□□□□□ -1.38
SYNE2-205ENST00000394768 SPATA45Q537H7 98 aa6.42□□□□□ -1.38
SYNE2-205ENST00000394768 SPAARA0A1B0GVQ0 90 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 CD69Q07108 199 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 PDCD1Q15116 288 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 LILRA6Q6PI73 481 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 STHQ8IWL8 128 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 TMEFF2Q9UIK5 374 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 SMIM18P0DKX4 95 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 RAE1P78406 368 aaKnown RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 ZIC1Q15915 447 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 OR13A1Q8NGR1 328 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 ITLN2Q8WWU7 325 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 IL36RNQ9UBH0 155 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 IL9P15248 144 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 CIARTQ8N365 385 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF414Q96IQ9 312 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 EDA2RQ9HAV5 297 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 SBF1O95248 1867 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 GTF3C1Q12789 2109 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 IFI27P40305 119 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 MBNL2Q5VZF2 373 aaKnown RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 OTPQ5XKR4 325 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 FRRS1LQ9P0K9 344 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 NKX2-6A6NCS4 301 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 TIMM23BQ5SRD1 257 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 RNF182Q8N6D2 247 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 OSR1Q8TAX0 266 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 NPIPB4C9JG80 1138 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 PRKNO60260 465 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 OR1K1Q8NGR3 316 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 DLL3Q9NYJ7 618 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 EREGO14944 169 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 OR2H2O95918 312 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 MYF5P13349 255 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 PLNP26678 52 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 PEF1Q9UBV8 284 aaKnown RBP6.41□□□□□ -1.38
SYNE2-205ENST00000394768 IGKV3OR2-268A0A0C4DH90 116 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM167AQ8TBQ9 72 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 FLRT3Q9NZU0 649 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 METRNQ9UJH8 293 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 NPIPB8E9PQR5 432 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 NPIPB9F8W1W9 429 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 NPIPB7O75200 414 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 DRD3P35462 400 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 FXYD3Q14802 87 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 ARPC1AQ92747 370 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM54Q969K7 222 aa6.41□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF205O95201 554 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 OR11H4Q8NGC9 324 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 SOSTQ9BQB4 213 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 TRAV8-7A0A075B6U6 113 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF25P17030 456 aaPredicted RBP6.4□□□□□ -1.38
SYNE2-205ENST00000394768 MVDP53602 400 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms