RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 DCHS2Q6V1P9 2916 aa9.2□□□□□ -0.94
TCOF1-203ENST00000394269 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 CD3EP07766 207 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 MYOD1P15172 320 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 STUMQ69YW2 141 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 TRAT1Q6PIZ9 186 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 NUP37Q8NFH4 326 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 RNASE6Q93091 150 aaKnown RBP9.19□□□□□ -0.94
TCOF1-203ENST00000394269 RPRMQ9NS64 109 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 TRAV38-1A0A0B4J264 116 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 NKX6-3A6NJ46 265 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 SNAPINO95295 136 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 TAS2R30P59541 319 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF66Q6ZN08 573 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 OR10P1Q8NGE3 313 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 IFI27L2Q9H2X8 130 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF835Q9Y2P0 537 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 GATA4P43694 442 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 RHOVQ96L33 236 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 AIFM2Q9BRQ8 373 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 PBDC1Q9BVG4 233 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 TMEM106BQ9NUM4 274 aa9.19□□□□□ -0.94
TCOF1-203ENST00000394269 UMAD1C9J7I0 102 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 YPEL1O60688 119 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 MMP9P14780 707 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 RAB5CP51148 216 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF525Q8N782 197 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
TCOF1-203ENST00000394269 hADV38S2A0JD32 116 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 NUDT19A8MXV4 375 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 IFNA4P05014 189 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 SLC25A6P12236 298 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 C1orf87Q8N0U7 546 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 SDSLQ96GA7 329 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 SEC11CQ9BY50 192 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 A0A1B0GWJ7 208 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 RAB29O14966 203 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 CD5P06127 495 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 AVPI1Q5T686 147 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 ISOC2Q96AB3 205 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 CLCC1Q96S66 551 aa9.18□□□□□ -0.94
TCOF1-203ENST00000394269 PLXNB1O43157 2135 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 SHISA9B4DS77 424 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 NDUFB3O43676 98 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 HPRT1P00492 218 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 HOXA1P49639 335 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-203ENST00000394269 TLE4Q04727 773 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 KLRB1Q12918 225 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 SOHLH1Q5JUK2 328 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 TMEM140Q9NV12 185 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 HSPB7Q9UBY9 170 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 SOX15O60248 233 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 FGF7P21781 194 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 C3orf36Q3SXR2 165 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 FAM122CQ6P4D5 195 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 IDI2-AS1Q9NZ38 188 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 RBFOX3A6NFN3 312 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 TMEM178BH3BS89 294 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 IGKV1-16P04430 117 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 NQO2P16083 231 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 UCNP55089 124 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 TCF23Q7RTU1 214 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 Q8TCH9 128 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 MS4A5Q9H3V2 200 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 SLC25A22Q9H936 323 aa9.17□□□□□ -0.94
TCOF1-203ENST00000394269 F2RL2O00254 374 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 DVL1O14640 695 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 TFF3Q07654 80 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 MUC15Q8N387 334 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 OR10X1Q8NGY0 326 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 TAF15Q92804 592 aaKnown RBP eCLIP9.16□□□□□ -0.94
TCOF1-203ENST00000394269 JKAMPQ9P055 326 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 LAMP3Q9UQV4 416 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 RAB7AP51149 207 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 RAB2AP61019 212 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 EIF4EBP1Q13541 118 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-203ENST00000394269 HFEQ30201 348 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 LRRC10Q5BKY1 277 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 TMEM200BQ69YZ2 307 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF383Q8NA42 475 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 ARHGAP32A7KAX9 2087 aa9.16□□□□□ -0.94
TCOF1-203ENST00000394269 IGHV1-69-2A0A0G2JMI3 117 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 APOBEC3AP31941 199 aaPredicted RBP9.15□□□□□ -0.94
TCOF1-203ENST00000394269 NCMAPQ5T1S8 102 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 ZFP82Q8N141 532 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 FAM222BQ8WU58 562 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 WDR61Q9GZS3 305 aaKnown RBP9.15□□□□□ -0.94
TCOF1-203ENST00000394269 SLC35B3Q9H1N7 401 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 HIPK2Q9H2X6 1198 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 HCFC1P51610 2035 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 RRHO14718 337 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms