RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 FAM3BP58499 235 aaPredicted RBP8.92□□□□□ -0.98
CALD1-203ENST00000393118 LYG1Q8N1E2 194 aa8.92□□□□□ -0.98
CALD1-203ENST00000393118 KLHDC1Q8N7A1 406 aa8.92□□□□□ -0.98
CALD1-203ENST00000393118 PLEKHA3Q9HB20 300 aa8.92□□□□□ -0.98
CALD1-203ENST00000393118 ZNF71Q9NQZ8 489 aaPredicted RBP8.92□□□□□ -0.98
CALD1-203ENST00000393118 ACTL6BO94805 426 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 COX5AP20674 150 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 KITLGP21583 273 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 DCTN5Q9BTE1 182 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 ANAPC10Q9UM13 185 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 GRIFINA4D1Z8 144 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 B4DEV8 164 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 KLF3P57682 345 aaPredicted RBP8.91□□□□□ -0.98
CALD1-203ENST00000393118 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 C1QL4Q86Z23 238 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 SPSB4Q96A44 273 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 TAAR6Q96RI8 345 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 ZNF891A8MT65 544 aaPredicted RBP8.91□□□□□ -0.98
CALD1-203ENST00000393118 KIAA1324LA8MWY0 1029 aaPredicted RBP8.91□□□□□ -0.98
CALD1-203ENST00000393118 PRRG2O14669 202 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 SLC25A6P12236 298 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 HOXA4Q00056 320 aaPredicted RBP8.91□□□□□ -0.98
CALD1-203ENST00000393118 OR1L6Q8NGR2 347 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 PINX1Q96BK5 328 aaKnown RBP8.91□□□□□ -0.98
CALD1-203ENST00000393118 ACTR3CQ9C0K3 210 aaPredicted RBP8.91□□□□□ -0.98
CALD1-203ENST00000393118 GTF3C1Q12789 2109 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 DUXBA0A1W2PPF3 345 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 K7ERU9 68 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 CCL20P78556 96 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 Q6ZT83 130 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 OR8G5Q8NG78 346 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 RAB9BQ9NP90 201 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 DECR2Q9NUI1 292 aa8.91□□□□□ -0.98
CALD1-203ENST00000393118 OTOGLQ3ZCN5 2332 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 PRDX2P32119 198 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 OR4A47Q6IF82 309 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 SLC35E3Q7Z769 313 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 OR5AU1Q8NGC0 362 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 OR4C12Q96R67 309 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 LPAR2Q9HBW0 351 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 USF3Q68DE3 2245 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 CHD3Q12873 2000 aaKnown RBP8.9□□□□□ -0.98
CALD1-203ENST00000393118 ZNF737O75373 536 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 CECR9P0C854 216 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 SSC4DQ8WTU2 575 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 LEAP2Q969E1 77 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 PPIAL4AQ9Y536 164 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 ARL2-SNX15V9GYD0 113 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 NUP210LQ5VU65 1888 aa8.9□□□□□ -0.98
CALD1-203ENST00000393118 C12orf77C9JDV5 145 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 ENSAO43768 121 aaKnown RBP8.9□□□□□ -0.99
CALD1-203ENST00000393118 TEX38Q6PEX7 206 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 ATOH7Q8N100 152 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 C9orf106Q8NAJ2 232 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 OR10G4Q8NGN3 311 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 OR10G9Q8NGN4 311 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 OR10G7Q8NGN6 311 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 GAL3ST2Q9H3Q3 398 aa8.9□□□□□ -0.99
CALD1-203ENST00000393118 TMEM210A6NLX4 147 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 A8MXE2 369 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 PRR33A8MZF0 331 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 S1PR2O95136 353 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 NAPSAO96009 420 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 CRISP2P16562 243 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 GABRA6Q16445 453 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 TMEM56Q96MV1 263 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 TMEM56-RWDD3S4R434 201 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 DIRC3C9JPN6 131 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 MKRN2OSH3BPM6 223 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 MMDQ15546 238 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 LDLRAD2Q5SZI1 272 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 H1FOOQ8IZA3 346 aaPredicted RBP8.89□□□□□ -0.99
CALD1-203ENST00000393118 OR4D5Q8NGN0 318 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 FAM122AQ96E09 287 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 SLC35E1Q96K37 410 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 OR2V2Q96R30 315 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 EGLN1Q9GZT9 426 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 RPRMQ9NS64 109 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 TRGV10A0A0A0MS01 117 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 SRP19P09132 144 aaKnown RBP8.89□□□□□ -0.99
CALD1-203ENST00000393118 TNFAIP6P98066 277 aaPredicted RBP8.89□□□□□ -0.99
CALD1-203ENST00000393118 SPATA45Q537H7 98 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 FAM201AQ5SY85 155 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 NAT8Q9UHE5 227 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 VAX2Q9UIW0 290 aa8.89□□□□□ -0.99
CALD1-203ENST00000393118 FOXF2Q12947 444 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 ASCL4Q6XD76 172 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 VKORC1L1Q8N0U8 176 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 ZNRF1Q8ND25 227 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 ABHD5Q8WTS1 349 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 WIPI2Q9Y4P8 454 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 SPTBN5Q9NRC6 3674 aaKnown RBP8.88□□□□□ -0.99
CALD1-203ENST00000393118 ATG2AQ2TAZ0 1938 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
CALD1-203ENST00000393118 MYO15AQ9UKN7 3530 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 CUL9Q8IWT3 2517 aa8.88□□□□□ -0.99
CALD1-203ENST00000393118 FOXI3A8MTJ6 420 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms