RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SNRPD2P62316 118 aaKnown RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 FAM3AP98173 230 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RUNX1Q01196 453 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 KIR2DS1Q14954 304 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 EBPQ15125 230 aaKnown RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RHEBQ15382 184 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 NEDD8Q15843 81 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 GCSAMLQ5JQS6 135 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 FAM78AQ5JUQ0 283 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 NCMAPQ5T1S8 102 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CST9Q5W186 159 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF660Q6AZW8 331 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 PRSS54Q6PEW0 395 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 HEPN1Q6WQI6 88 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 C12orf54Q6X4T0 127 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 FOXI2Q6ZQN5 318 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 WDR86Q86TI4 376 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF695Q8IW36 515 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 DEFB107AQ8IZN7 70 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF664Q8N3J9 261 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 Q8N402 240 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CBR4Q8N4T8 237 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 C2orf73Q8N5S3 287 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 COX18Q8N8Q8 333 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 PROKR2Q8NFJ6 384 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 OR4S1Q8NGB4 309 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 OR5T3Q8NGG3 340 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 OR10K1Q8NGX5 313 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 OR10X1Q8NGY0 326 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 OR1P1Q8NH06 330 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 SYNPRQ8TBG9 265 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM239Q8WW34 195 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CAMK2N2Q96S95 79 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TIMM17AQ99595 171 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 PITX2Q99697 317 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 FOXC2Q99958 501 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 FAAP24Q9BTP7 215 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 SYT4Q9H2B2 425 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CST9LQ9H4G1 147 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 WDR55Q9H6Y2 383 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 PLEKHA1Q9HB21 404 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ACOT13Q9NPJ3 140 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 UBQLN4Q9NRR5 601 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF355PQ9NSJ1 428 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 SPANXCQ9NY87 97 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF282Q9UDV7 671 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 HHLA2Q9UM44 414 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TFR2Q9UP52 801 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM14AQ9Y6G1 99 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 PLXND1Q9Y4D7 1925 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CACNA1GO43497 2377 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 A0A0G2JND7 137 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 A0A1B0GW15 77 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM223A0PJW6 202 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM189A5PLL7 270 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 TVP23AA6NH52 213 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 ARL5CA6NH57 179 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 EFCAB9A8MZ26 197 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 MCRIP1C9JLW8 97 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 H7C1H1 209 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 TNFRSF11BO00300 401 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 MFNGO00587 321 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 GABRPO00591 440 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 YPEL1O60688 119 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 YIF1AO95070 293 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 WISP3O95389 354 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 HAND1O96004 215 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 OXTP01178 125 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 HBZP02008 142 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 CD5P06127 495 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 CD14P08571 375 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 OR8U9P0C7N5 309 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 AKR1C4P17516 323 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 OR12D2P58182 307 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF121P58317 390 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 LINC00315P59091 139 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 RPS15AP62244 130 aaKnown RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 RPS23P62266 143 aaKnown RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF616Q08AN1 781 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 EIF4EBP1Q13541 118 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 RAB31Q13636 194 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 TSNQ15631 228 aaKnown RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 IQCJQ1A5X6 159 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 SCGB2B2Q4G0G5 96 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 ACSM3Q53FZ2 586 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 LINC00483Q53H64 154 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 KHDC3LQ587J8 217 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 HENMT1Q5T8I9 393 aaKnown RBP1.86□□□□□ -2.11
PTPRC-205ENST00000391970 SAMD13Q5VXD3 122 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 TBPL2Q6SJ96 375 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 FAM131AQ6UXB0 335 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 HIST2H3AQ71DI3 136 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 NEGR1Q7Z3B1 354 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 SLC35E3Q7Z769 313 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 CMTM8Q8IZV2 173 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 LRRC75AQ8NAA5 344 aa1.86□□□□□ -2.11
PTPRC-205ENST00000391970 OR5A2Q8NGI9 324 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms