RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 PCGF1Q9BSM1 259 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 J3QW42 95 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 CD59P13987 128 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 CRISP2P16562 243 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 BRS3P32247 399 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 HERPUD1Q15011 391 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 NRN1LQ496H8 165 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 OR4A47Q6IF82 309 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
ZNF541-203ENST00000391901 WDYHV1Q96HA8 205 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 SFXN3Q9BWM7 321 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 RSPO3Q9BXY4 272 aaPredicted RBP12.3□□□□□ -0.44
ZNF541-203ENST00000391901 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 CADP27708 2225 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 MARCH11A6NNE9 402 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 ZIC4Q8N9L1 334 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 VOPP1Q96AW1 172 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 TGIF2-C20orf24A0A0A6YYL0 155 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 IGHV1-2P23083 117 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
ZNF541-203ENST00000391901 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 RARRES2Q99969 163 aa12.3□□□□□ -0.44
ZNF541-203ENST00000391901 MRPS18CQ9Y3D5 142 aaKnown RBP12.3□□□□□ -0.44
ZNF541-203ENST00000391901 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
ZNF541-203ENST00000391901 GBF1Q92538 1859 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 SSX8Q7RTT4 187 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 WBP1Q96G27 269 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 REG4Q9BYZ8 158 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 PROB1E7EW31 1015 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 GFRA3O60609 400 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 ZG16O60844 167 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
ZNF541-203ENST00000391901 HINT1P49773 126 aaPredicted RBP12.29□□□□□ -0.44
ZNF541-203ENST00000391901 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
ZNF541-203ENST00000391901 GLRXP35754 106 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 FAM201AQ5SY85 155 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 TAF15Q92804 592 aaKnown RBP eCLIP12.29□□□□□ -0.44
ZNF541-203ENST00000391901 RTBDNQ9BSG5 229 aaPredicted RBP12.29□□□□□ -0.44
ZNF541-203ENST00000391901 ASCL3Q9NQ33 180 aa12.29□□□□□ -0.44
ZNF541-203ENST00000391901 MPDZO75970 2070 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
ZNF541-203ENST00000391901 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 C9orf106Q8NAJ2 232 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 HILPDAQ9Y5L2 63 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 CEACAM1P13688 526 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 WNT5AP41221 380 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 USF3Q68DE3 2245 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 C12orf77C9JDV5 145 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 F2RL2O00254 374 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 CD99P14209 185 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
ZNF541-203ENST00000391901 TMEM140Q9NV12 185 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 C1RLQ9NZP8 487 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 PXMP4Q9Y6I8 212 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 ANAPC1Q9H1A4 1944 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 RNF2Q99496 336 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 CLDN16Q9Y5I7 305 aa12.28□□□□□ -0.44
ZNF541-203ENST00000391901 ZNF735P0CB33 412 aa12.27□□□□□ -0.44
ZNF541-203ENST00000391901 MEF2BQ02080 365 aaPredicted RBP12.27□□□□□ -0.44
ZNF541-203ENST00000391901 FAM216AQ8WUB2 273 aa12.27□□□□□ -0.44
ZNF541-203ENST00000391901 ABHD17AQ96GS6 310 aa12.27□□□□□ -0.44
ZNF541-203ENST00000391901 RNF126Q9BV68 326 aa12.27□□□□□ -0.44
ZNF541-203ENST00000391901 CXorf1O96002 111 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 C10orf113Q5VZT2 155 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 E9PQ18 207 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 PDE6DO43924 150 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 LGALS7P47929 136 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
ZNF541-203ENST00000391901 HCP5Q6MZN7 132 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 GALNT14Q96FL9 552 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 C14orf144Q96I85 54 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
ZNF541-203ENST00000391901 RPEL1Q2QD12 228 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 WDR61Q9GZS3 305 aaKnown RBP12.27□□□□□ -0.45
ZNF541-203ENST00000391901 TNFRSF19Q9NS68 423 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 SEMA5BQ9P283 1151 aa12.27□□□□□ -0.45
ZNF541-203ENST00000391901 SHANK1Q9Y566 2161 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 HELTA6NFD8 242 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 M0QZ24 198 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 CCL1P22362 96 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 PLAURQ03405 335 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 ACSF3Q4G176 576 aaPredicted RBP12.26□□□□□ -0.45
ZNF541-203ENST00000391901 SMIM8Q96KF7 97 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 IDI2-AS1Q9NZ38 188 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 FBLN5Q9UBX5 448 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 JPT1Q9UK76 154 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 WASHC3Q9Y3C0 194 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 NOTCH3Q9UM47 2321 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 RPL8P62917 257 aaKnown RBP12.26□□□□□ -0.45
ZNF541-203ENST00000391901 MIC13Q5XKP0 118 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 ZNF343Q6P1L6 599 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 OR8I2Q8N0Y5 310 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 SLC35E4Q6ICL7 350 aa12.26□□□□□ -0.45
ZNF541-203ENST00000391901 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms