RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 CASC3O15234 703 aaKnown RBP-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 SHOX2O60902 331 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 PPBPP02775 128 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 SHBGP04278 402 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 OR4D2P58180 307 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 UBE2IP63279 158 aaKnown RBP-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 GTF2BQ00403 316 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 ZNF846Q147U1 533 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 TRAM1Q15629 374 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 KRTAP19-8Q3LI54 63 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 LINC00575Q6W349 94 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 PACRGLQ8N7B6 248 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 OR6K2Q8NGY2 324 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 OR6N2Q8NGY6 317 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 TNFAIP8L1Q8WVP5 186 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 OR5P2Q8WZ92 322 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 MAP1LC3CQ9BXW4 147 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 YIPF3Q9GZM5 350 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 DMAC2Q9NW81 257 aa-1.34□□□□□ -2.62
RNU6-1009P-201ENST00000390996 MCM3APO60318 1980 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CASQ2O14958 399 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 INE1O15225 51 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ATP8B1O43520 1251 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CREBL2O60519 120 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 SNX4O95219 450 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 VAPBO95292 243 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 GIMD1P0DJR0 217 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 RPA3P35244 121 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 HSPA9P38646 679 aaKnown RBP-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FXYD7P58549 80 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FAM27BQ5VT28 67 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FAHD1Q6P587 224 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 Q6ZT83 130 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ATOH7Q8N100 152 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FAM45AQ8TCE6 357 aa-1.35□□□□□ -2.63
RNU6-1009P-201ENST00000390996 PHLPP2Q6ZVD8 1323 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 AKR7A2O43488 359 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 GSTZ1O43708 216 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 HYPMO75409 117 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 OR10J1P30954 320 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CLDN8P56748 225 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FXYD6P3P58550 94 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 PSG9Q00887 426 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CLEC2AQ6UVW9 174 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 OR13C8Q8NGS7 320 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ACY3Q96HD9 319 aa-1.36□□□□□ -2.63
RNU6-1009P-201ENST00000390996 M0QYV0 167 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 NUP62P37198 522 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CA7P43166 264 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 BEX3Q00994 111 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 AKR1C1Q04828 323 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ZNF345Q14585 488 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CLECL1Q8IZS7 167 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 TMEM156Q8N614 296 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 PXT1Q8NFP0 134 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CIB1Q99828 191 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 COPS4Q9BT78 406 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 DCSTAMPQ9H295 470 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 SYT4Q9H2B2 425 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 IFNKQ9P0W0 207 aa-1.37□□□□□ -2.63
RNU6-1009P-201ENST00000390996 COL4A5P29400 1685 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CYTH3O43739 400 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 SRMP19623 302 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 HIKESHIQ53FT3 197 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 C9orf64Q5T6V5 341 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FAM19A5Q7Z5A7 132 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 LYG2Q86SG7 212 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CPNE2Q96FN4 548 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 NMNAT3Q96T66 252 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 IQCGQ9H095 443 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 TLNRD1Q9H1K6 362 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CASP8AP2Q9UKL3 1982 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ABCC12Q96J65 1359 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FLNBO75369 2602 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ANAPC1Q9H1A4 1944 aa-1.38□□□□□ -2.63
RNU6-1009P-201ENST00000390996 RALGAPA2Q2PPJ7 1873 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 H0YC42 278 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 NOS1APO75052 506 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 SPRR2DP22532 72 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 BRS3P32247 399 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FOXA3P55318 350 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 BAP18Q8IXM2 172 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 FAM213BQ8TBF2 198 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ACER3Q9NUN7 267 aa-1.39□□□□□ -2.63
RNU6-1009P-201ENST00000390996 ALMS1Q8TCU4 4167 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 CCDC169A6NNP5 214 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 PMP2P02689 132 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 TFPTP0C1Z6 253 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 IFITM1P13164 125 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 HERVK_113P63121 156 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 SBSNQ6UWP8 590 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 LRRC34Q8IZ02 419 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 LRRC39Q96DD0 335 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 RMND1Q9NWS8 449 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 NAT8Q9UHE5 227 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 LOC285556D6RIA3 1793 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 TGP01266 2768 aa-1.4□□□□□ -2.63
RNU6-1009P-201ENST00000390996 C5orf67F2Z3F1 127 aa-1.41□□□□□ -2.64
RNU6-1009P-201ENST00000390996 ANXA8P13928 327 aa-1.41□□□□□ -2.64
RNU6-1009P-201ENST00000390996 RCVRNP35243 200 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms