RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 RBP7Q96R05 134 aa0.88□□□□□ -2.27
SNORA40.4-201ENST00000390971 MICAL3Q7RTP6 2002 aa0.88□□□□□ -2.27
SNORA40.4-201ENST00000390971 SCAF11Q99590 1463 aaKnown RBP0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 LRPPRCP42704 1394 aaKnown RBP0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 SMARCA4P51532 1647 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 ZNF879B4DU55 563 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 HLA-DQB2P05538 268 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 RPL28P46779 137 aaKnown RBP0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 EBPQ15125 230 aaKnown RBP0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 ZNHIT3Q15649 155 aaPredicted RBP0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 LRRC26Q2I0M4 334 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 C9orf64Q5T6V5 341 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 ZNHIT6Q9NWK9 470 aaKnown RBP0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 RIMS2Q9UQ26 1411 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 PCDH15Q96QU1 1955 aa0.87□□□□□ -2.27
SNORA40.4-201ENST00000390971 A0A1W2PP64 1363 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 MYOFQ9NZM1 2061 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 H3BT86 120 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 TPM1P09493 284 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 DEFA4P12838 97 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 GRPRP30550 384 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 ETV1P50549 477 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 RAB14P61106 215 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 SLAMF1Q13291 335 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 PLPPR5Q32ZL2 321 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 GPHB5Q86YW7 130 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 CHMP5Q9NZZ3 219 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 CPAMD8Q8IZJ3 1885 aa0.86□□□□□ -2.27
SNORA40.4-201ENST00000390971 A0A1B0GW54 56 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 MEIS3P1A6NDR6 274 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 STX10O60499 249 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 NEMFO60524 1076 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 NPPAP01160 153 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 HLA-DRB5Q30154 266 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 DNAL1Q4LDG9 190 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 AADACL4Q5VUY2 407 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 CRLF3Q8IUI8 442 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 C19orf60Q96EN9 201 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 MED10Q9BTT4 135 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 TMEM109Q9BVC6 243 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 CHST6Q9GZX3 395 aa0.85□□□□□ -2.27
SNORA40.4-201ENST00000390971 OR51F1A6NGY5 319 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 CCRL2O00421 344 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 AZIN1O14977 448 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 ATP8B1O43520 1251 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 PPBPP02775 128 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 TRGC1P0CF51 173 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 CXCL2P19875 107 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 REG1BP48304 166 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 C4orf26Q17RF5 130 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 ACSM3Q53FZ2 586 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 GID4Q8IVV7 300 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 RPP25LQ8N5L8 163 aaKnown RBP0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 RAB2BQ8WUD1 216 aa0.84□□□□□ -2.27
SNORA40.4-201ENST00000390971 SIPA1L1O43166 1804 aa0.84□□□□□ -2.28
SNORA40.4-201ENST00000390971 NAV1Q8NEY1 1877 aa0.84□□□□□ -2.28
SNORA40.4-201ENST00000390971 TEX50A0A1B0GTY4 177 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 C5orf49A4QMS7 147 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 MKRN2OSH3BPM6 223 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 CXCL3P19876 107 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 SLCO1A2P46721 670 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 HLA-DRB3P79483 266 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 RASSF6Q6ZTQ3 369 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 SPATA24Q86W54 205 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 DYNAPQ8N1N2 210 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 SPERTQ8NA61 448 aa0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 NSRP1Q9H0G5 558 aaKnown RBP0.83□□□□□ -2.28
SNORA40.4-201ENST00000390971 ARFGEF3Q5TH69 2177 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 ATP6V1G2O95670 118 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 RPS24P62847 133 aaKnown RBP0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 UMODL1-AS1Q8N2C9 162 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 OR5L1Q8NGL2 311 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 SLC37A2Q8TED4 501 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 TIPINQ9BVW5 301 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 SNURFQ9Y675 71 aa0.82□□□□□ -2.28
SNORA40.4-201ENST00000390971 F8VZ95 297 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 GEMIN2O14893 280 aaKnown RBP0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 ADAP1O75689 374 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 C10orf55Q5SWW7 151 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 C9orf163Q8N9P6 203 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 ZNF75CPQ92670 426 aaPredicted RBP0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 ANKRD36BP1Q96IX9 119 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 REG4Q9BYZ8 158 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 OR52A5Q9H2C5 316 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 XAGE1AQ9HD64 81 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 CD300AQ9UGN4 299 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 NAT8Q9UHE5 227 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 TP53TG1Q9Y2A0 90 aa0.81□□□□□ -2.28
SNORA40.4-201ENST00000390971 TMED7-TICAM2A0A0A6YYA0 188 aa0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 TOX3O15405 576 aaPredicted RBP0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 MSNP26038 577 aaKnown RBP0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 CD40LGP29965 261 aa0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 TESCQ96BS2 214 aa0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 CCL13Q99616 98 aa0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 CFAP45Q9UL16 551 aa0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 HEATR5BQ9P2D3 2071 aa0.8□□□□□ -2.28
SNORA40.4-201ENST00000390971 GLI3P10071 1580 aa0.79□□□□□ -2.28
SNORA40.4-201ENST00000390971 TMEM269A0A1B0GVZ9 245 aa0.79□□□□□ -2.28
SNORA40.4-201ENST00000390971 GOLGA6L10A6NI86 522 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms