RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 OR5AK3PQ8NH89 298 aa0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 C12orf43Q96C57 262 aaKnown RBP0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 LRRC45Q96CN5 670 aa0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 CHST6Q9GZX3 395 aa0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 HDGFL3Q9Y3E1 203 aa0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 PCYT1BQ9Y5K3 369 aaPredicted RBP0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 GREB1Q4ZG55 1949 aa0.38□□□□□ -2.35
SNORA40.3-201ENST00000390964 GLI3P10071 1580 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 LRPPRCP42704 1394 aaKnown RBP0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 LOC100506127A0A0U1RQW1 187 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 A0A1B0GW54 56 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 METTL15A6NJ78 407 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 DEFA4P12838 97 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 F8A1P23610 371 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 RAB14P61106 215 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 HPCAP84074 193 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 GNA13Q14344 377 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 Q3ZCU0 254 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 ACSM3Q53FZ2 586 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 C10orf55Q5SWW7 151 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 C9orf64Q5T6V5 341 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 FAM45BPQ6NSW5 357 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 COPS6Q7L5N1 327 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 GPHB5Q86YW7 130 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 ATP6V1C2Q8NEY4 427 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 OR10D3Q8NH80 312 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 PPCDCQ96CD2 204 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 SIKE1Q9BRV8 207 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 SNURFQ9Y675 71 aa0.37□□□□□ -2.35
SNORA40.3-201ENST00000390964 NCOA6Q14686 2063 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 GOLGA6L10A6NI86 522 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 H3BT86 120 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 ATP8B1O43520 1251 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 BRI3O95415 125 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 S100A9P06702 114 aaKnown RBP0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 REG1BP48304 166 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 EBPQ15125 230 aaKnown RBP0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 UMODL1-AS1Q8N2C9 162 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 RPP25LQ8N5L8 163 aaKnown RBP0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 MRPL57Q9BQC6 102 aaKnown RBP0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 MROQ9BYG7 248 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 REG4Q9BYZ8 158 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 GMEB1Q9Y692 573 aa0.36□□□□□ -2.35
SNORA40.3-201ENST00000390964 IBA57-AS1B1ANH7 110 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 TRGC1P0CF51 173 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 SYT1P21579 422 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 SMAGPQ0VAQ4 97 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 C17orf78Q8N4C9 275 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 RBP7Q96R05 134 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 ZNHIT6Q9NWK9 470 aaKnown RBP0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 RIMS2Q9UQ26 1411 aa0.35□□□□□ -2.35
SNORA40.3-201ENST00000390964 A0A1W2PP64 1363 aa0.34□□□□□ -2.35
SNORA40.3-201ENST00000390964 TEX50A0A1B0GTY4 177 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 PPBPP02775 128 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 HLA-DQB2P05538 268 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 KDELR2P33947 212 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 SLCO1A2P46721 670 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 RPS24P62847 133 aaKnown RBP0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 EIF4G1Q04637 1599 aaKnown RBP0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 C4orf26Q17RF5 130 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 C12orf29Q8N999 325 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 ZNF439Q8NDP4 499 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 SETD5Q9C0A6 1442 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 XAGE1AQ9HD64 81 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 AGPAT3Q9NRZ7 376 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 C1orf109Q9NX04 203 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 LHFPL6Q9Y693 200 aa0.34□□□□□ -2.36
SNORA40.3-201ENST00000390964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 MSMBP08118 114 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 RNASE3P12724 160 aaKnown RBP0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 CCL5P13501 91 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 GRPRP30550 384 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 SLAMF1Q13291 335 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 ZNHIT3Q15649 155 aaPredicted RBP0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 RASSF6Q6ZTQ3 369 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 ZNF565Q8N9K5 539 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 OR8B3Q8NGG8 313 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 RAB2BQ8WUD1 216 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 TMEM109Q9BVC6 243 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 NAT8Q9UHE5 227 aa0.33□□□□□ -2.36
SNORA40.3-201ENST00000390964 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 TONSLQ96HA7 1378 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 STRCQ7RTU9 1775 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 EXPH5Q8NEV8 1989 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 LAMA4Q16363 1823 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 TMED7-TICAM2A0A0A6YYA0 188 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 C5orf49A4QMS7 147 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 MKRN2OSH3BPM6 223 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 CCRL2O00421 344 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 AZIN1O14977 448 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 STX10O60499 249 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 NEMFO60524 1076 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 TFPTP0C1Z6 253 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 CXCL2P19875 107 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 CXCL3P19876 107 aa0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 MSNP26038 577 aaKnown RBP0.32□□□□□ -2.36
SNORA40.3-201ENST00000390964 HLA-DRB3P79483 266 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms