RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CLDN14O95500 239 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 TOMM40O96008 361 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 PNPP00491 289 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 HLA-HP01893 362 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 GNB3P16520 340 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 BRS3P32247 399 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 MDH2P40926 338 aaKnown RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 NPBWR2P48146 333 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 BPIFB3P59826 476 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 RPL15P61313 204 aaKnown RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 PCBD1P61457 104 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 FAM27E3Q08E93 113 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 CDSNQ15517 529 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 GABRA6Q16445 453 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 BEAN1Q3B7T3 259 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 FAM27BQ5VT28 67 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 NCR3LG1Q68D85 454 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 TMEM182Q6ZP80 229 aaPredicted RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 SSX7Q7RTT5 188 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 DTX2Q86UW9 622 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 FOXRED2Q8IWF2 684 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 CMTM1Q8IZ96 169 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 OR2AJ1Q8NGZ0 328 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 OR5B3Q8NH48 314 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 ERGIC1Q969X5 290 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 SPSB1Q96BD6 273 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 RNF125Q96EQ8 232 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 C1orf147Q96MC9 270 aaPredicted RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 TMEM56Q96MV1 263 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 ATP5SQ99766 215 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 LPAR2Q9HBW0 351 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 AURKAIP1Q9NWT8 199 aaPredicted RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 MRPL22Q9NWU5 206 aaKnown RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 FAM206AQ9NX38 181 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 LSM5Q9Y4Y9 91 aaKnown RBP6.27□□□□□ -1.41
TRBV28-201ENST00000390400 TMEM56-RWDD3S4R434 201 aa6.27□□□□□ -1.41
TRBV28-201ENST00000390400 USP9YO00507 2555 aaPredicted RBP6.26□□□□□ -1.41
TRBV28-201ENST00000390400 RNF212BA8MTL3 300 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF878C9JN71 531 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 H7BYZ3 331 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 HPRT1P00492 218 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 IFNA5P01569 189 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 H2BFMP0C1H6 154 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 PGA5P0DJD9 388 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 NKX2-1P43699 371 aaPredicted RBP6.26□□□□□ -1.41
TRBV28-201ENST00000390400 TPPP2P59282 170 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF92Q03936 586 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 ENDOGQ14249 297 aaKnown RBP6.26□□□□□ -1.41
TRBV28-201ENST00000390400 ABCA11PQ4W5N1 156 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 TIMM23BQ5SRD1 257 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 OTPQ5XKR4 325 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 SSX8Q7RTT4 187 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 LINC00346Q8IVM7 164 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 PNKDQ8N490 385 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 KLHDC1Q8N7A1 406 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 CPEB3Q8NE35 698 aaKnown RBP6.26□□□□□ -1.41
TRBV28-201ENST00000390400 OR5L1Q8NGL2 311 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 MSI2Q96DH6 328 aaKnown RBP6.26□□□□□ -1.41
TRBV28-201ENST00000390400 RAB40CQ96S21 281 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 MAGT1Q9H0U3 335 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 OR51I2Q9H344 312 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 LIN7CQ9NUP9 197 aaKnown RBP6.26□□□□□ -1.41
TRBV28-201ENST00000390400 OR6C3Q9NZP0 311 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 ANXA10Q9UJ72 324 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF391Q9UJN7 358 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 LHFPL6Q9Y693 200 aa6.26□□□□□ -1.41
TRBV28-201ENST00000390400 A0A0U1RQV5 110 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 A0A1W2PR80 420 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A8PA6NJQ4 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A7PA6NKC0 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF705GA8MUZ8 300 aaPredicted RBP6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A22PA8MWA6 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A12PA8MX19 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A23PA8MXZ1 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 TTRP02766 147 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 MMP7P09237 267 aaPredicted RBP6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A13PP0C7W8 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FAM90A24PP0C7X0 464 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 PATE4P0C8F1 98 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF728P0DKX0 622 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF32P17041 273 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 FUT3P21217 361 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 GLRA1P23415 457 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 S100GP29377 79 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 RPS27P42677 84 aaKnown RBP6.25□□□□□ -1.41
TRBV28-201ENST00000390400 TMEM50BP56557 158 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 RBX1P62877 108 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 GRB2P62993 217 aaKnown RBP6.25□□□□□ -1.41
TRBV28-201ENST00000390400 COL10A1Q03692 680 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 TFF3Q07654 80 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 BSXQ3C1V8 233 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 PLAC9Q5JTB6 97 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 GFI1BQ5VTD9 330 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 WDR25Q64LD2 544 aaPredicted RBP6.25□□□□□ -1.41
TRBV28-201ENST00000390400 ZNF343Q6P1L6 599 aa6.25□□□□□ -1.41
TRBV28-201ENST00000390400 GLIPR1L1Q6UWM5 242 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms