RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 GTF3AQ92664 365 aaKnown RBP11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 SLC35B3Q9H1N7 401 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 DPRXA6NFQ7 191 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 RAB4AP20338 218 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 OTX1P32242 354 aaPredicted RBP11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 CLEC5AQ9NY25 188 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 A0A1W2PNU3 283 aaPredicted RBP11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 ZNF705GA8MUZ8 300 aaPredicted RBP11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 C17orf98A8MV24 154 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 K7EM74 188 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 FAM90A1Q86YD7 464 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
PTPRN2-202ENST00000389416 IGKV1D-8A0A087WSZ0 117 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 CHEK1O14757 476 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 TM4SF5O14894 197 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 TMEM30BQ3MIR4 351 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 ZNF672Q499Z4 452 aaPredicted RBP11□□□□□ -0.65
PTPRN2-202ENST00000389416 PDPNQ86YL7 162 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 C7orf69Q9H7B7 122 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 PITPNC1Q9UKF7 332 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 RBFOX3A6NFN3 312 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 THBDP07204 575 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 ZP1P60852 638 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 ZNF345Q14585 488 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 H1FOOQ8IZA3 346 aaPredicted RBP11□□□□□ -0.65
PTPRN2-202ENST00000389416 OR5R1Q8NH85 324 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 RND2P52198 227 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 MEF2CQ06413 473 aaPredicted RBP11□□□□□ -0.65
PTPRN2-202ENST00000389416 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 DHRS7BQ6IAN0 325 aaPredicted RBP11□□□□□ -0.65
PTPRN2-202ENST00000389416 PCSK4Q6UW60 755 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 NEUROG1Q92886 237 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 MS4A10Q96PG2 267 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 PLXNB3Q9ULL4 1909 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 CCDC168Q8NDH2 2452 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 SRRM5B3KS81 715 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 PLAUP00749 431 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 SEC11BP0C7V7 166 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 C4orf17Q53FE4 359 aa11□□□□□ -0.65
PTPRN2-202ENST00000389416 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
PTPRN2-202ENST00000389416 EIF3GO75821 320 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 LY6HO94772 140 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 NTF4P34130 210 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 PAX5Q02548 391 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 SSX7Q7RTT5 188 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 FAM216AQ8WUB2 273 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 OR4C12Q96R67 309 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 SPINK4O60575 86 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 PPOXP50336 477 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 DBX1A6NMT0 343 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 PSPNO60542 156 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 PAGE4O60829 102 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 MBNL2Q5VZF2 373 aaKnown RBP10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 UQCC3Q6UW78 93 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 CHRDL1Q9BU40 450 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 FREM1Q5H8C1 2179 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 PITX3O75364 302 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 DNM1P46Q6ZS02 220 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 SLC35E3Q7Z769 313 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 RTBDNQ9BSG5 229 aaPredicted RBP10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 RSRP1Q9BUV0 290 aa10.99□□□□□ -0.65
PTPRN2-202ENST00000389416 C11orf94C9JXX5 98 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 GNG4P50150 75 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 SCGB2A2Q13296 93 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 IL22RA2Q969J5 263 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 EAF1Q96JC9 268 aaPredicted RBP10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 RNF2Q99496 336 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 SOSTQ9BQB4 213 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 OBSL1O75147 1896 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 TRBV6-7A0A0A0MS04 114 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 CTRB1P17538 263 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 LOXL3P58215 753 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 FABP9Q0Z7S8 132 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 FXYD3Q14802 87 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 CTRB2Q6GPI1 263 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 WFDC3Q8IUB2 231 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 RABAC1Q9UI14 185 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 PXMP4Q9Y6I8 212 aa10.98□□□□□ -0.65
PTPRN2-202ENST00000389416 IGKV3-15P01624 115 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms