RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 RPL39P5Q59GN2 51 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 OR4C5Q8NGB2 326 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 DEPPQ9NTK1 212 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 CBY3A6NI87 242 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 F5H697 171 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 HYPMO75409 117 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 HIST1H1EP10412 219 aaKnown RBP14.57□□□□□ -0.08
SGCB-201ENST00000381431 NHLRC2Q8NBF2 726 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 LOXL4Q96JB6 756 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 HSPB9Q9BQS6 159 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 C1QTNF5Q9BXJ0 243 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 PLCE1Q9P212 2302 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 WDR90Q96KV7 1748 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 H3BTX0 84 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 M0QZ24 198 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 CELA3BP08861 270 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 TRGC1P0CF51 173 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 HOXB1P14653 301 aaPredicted RBP14.56□□□□□ -0.08
SGCB-201ENST00000381431 FXYD3Q14802 87 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 PQLC2Q6ZP29 291 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 GCSAMQ8N6F7 178 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 FGFBP3Q8TAT2 258 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 WBP1Q96G27 269 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 TNFRSF19Q9NS68 423 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 PRSS1P07477 247 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 CECR9P0C854 216 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 BRS3P32247 399 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 RNF144BQ7Z419 303 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 SCN8AQ9UQD0 1980 aa14.56□□□□□ -0.08
SGCB-201ENST00000381431 TRBV23-1A0A0A0MS06 115 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 KLF7O75840 302 aaPredicted RBP14.55□□□□□ -0.08
SGCB-201ENST00000381431 APCSP02743 223 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 AGAP20933 346 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 CRYBB3P26998 211 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 FOXG1P55316 489 aaPredicted RBP14.55□□□□□ -0.08
SGCB-201ENST00000381431 C1orf174Q8IYL3 243 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 P2RX4Q99571 388 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 FAM117AQ9C073 453 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 SIP14410 1827 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 C17orf98A8MV24 154 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 PKIAP61925 76 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 WDFY1Q8IWB7 410 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 FBLN5Q9UBX5 448 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 TEX50A0A1B0GTY4 177 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 ECSCRQ19T08 205 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 ASCL5Q7RTU5 278 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 ZNF596Q8TC21 504 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 TMEM45BQ96B21 275 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 C5orf63A6NC05 138 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 PGPA6NDG6 321 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 REG1AP05451 166 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 PRNTQ86SH4 94 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 QTRT1Q9BXR0 403 aaKnown RBP14.55□□□□□ -0.08
SGCB-201ENST00000381431 C1RLQ9NZP8 487 aa14.55□□□□□ -0.08
SGCB-201ENST00000381431 CARHSP1Q9Y2V2 147 aaKnown RBP14.55□□□□□ -0.08
SGCB-201ENST00000381431 LRRK1Q38SD2 2015 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 F2RL2O00254 374 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 DNASE2O00115 360 aaPredicted RBP14.54□□□□□ -0.08
SGCB-201ENST00000381431 IBA57Q5T440 356 aaKnown RBP14.54□□□□□ -0.08
SGCB-201ENST00000381431 TMEM191AQ9H0A3 160 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 UBTD1Q9HAC8 227 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 BET1LQ9NYM9 111 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 DIRC3C9JPN6 131 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 RRHO14718 337 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 KBTBD11O94819 623 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 ZNF385CQ66K41 422 aaPredicted RBP14.54□□□□□ -0.08
SGCB-201ENST00000381431 FAM89BQ8N5H3 189 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 CISD1Q9NZ45 108 aaKnown RBP14.54□□□□□ -0.08
SGCB-201ENST00000381431 JPT1Q9UK76 154 aa14.54□□□□□ -0.08
SGCB-201ENST00000381431 LOC102723996A0A087X1L8 192 aa14.53□□□□□ -0.08
SGCB-201ENST00000381431 CTSSP25774 331 aa14.53□□□□□ -0.08
SGCB-201ENST00000381431 FAM27E3Q08E93 113 aa14.53□□□□□ -0.08
SGCB-201ENST00000381431 RTN4RL2Q86UN3 420 aa14.53□□□□□ -0.08
SGCB-201ENST00000381431 OR13A1Q8NGR1 328 aa14.53□□□□□ -0.08
SGCB-201ENST00000381431 KRTCAP3Q53RY4 240 aa14.53□□□□□ -0.08
SGCB-201ENST00000381431 IGKV1-12A0A0C4DH73 117 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 IGKV1D-12P01611 117 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 OR1P1Q8NH06 330 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 IDI2-AS1Q9NZ38 188 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 PTPRDP23468 1912 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 GRIFINA4D1Z8 144 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 TCTAP57738 103 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 SLC35E4Q6ICL7 350 aa14.52□□□□□ -0.08
SGCB-201ENST00000381431 EAF1Q96JC9 268 aaPredicted RBP14.52□□□□□ -0.08
SGCB-201ENST00000381431 ZNF716A6NP11 495 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 ISLRO14498 428 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 NUBP1P53384 320 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 ZNF788Q6ZQV5 615 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 ZIC4Q8N9L1 334 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 PLSCR2Q9NRY7 297 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 MGAMO43451 1857 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 TFF1P04155 84 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 ZNF25P17030 456 aaPredicted RBP14.52□□□□□ -0.09
SGCB-201ENST00000381431 CDX1P47902 265 aaPredicted RBP14.52□□□□□ -0.09
SGCB-201ENST00000381431 RIGQ13278 110 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 NPIPB3Q92617 1050 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 GSX1Q9H4S2 264 aaPredicted RBP14.52□□□□□ -0.09
SGCB-201ENST00000381431 HIGD1AQ9Y241 93 aa14.52□□□□□ -0.09
SGCB-201ENST00000381431 MC5RP33032 325 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 SELENOTP62341 195 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms