RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SPNS3Q6ZMD2 512 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 PNKDQ8N490 385 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 TM4SF5O14894 197 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 CRYBA1P05813 215 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 PAX5Q02548 391 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 C10orf113Q5VZT2 155 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 LRP11Q86VZ4 500 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 Q8WTZ3 238 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 PRO3102Q9H379 93 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 SLC25A15Q9Y619 301 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 TSTD3H0UI37 97 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 SRSF10O75494 262 aaKnown RBP10.31□□□□□ -0.76
GABPB1-203ENST00000380877 TMEM42Q69YG0 159 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 PIP4P1Q86T03 277 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 SMIM8Q96KF7 97 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 NAT8Q9UHE5 227 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 CEACAM18A8MTB9 384 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 TFF1P04155 84 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 CTRB1P17538 263 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 HGFACQ04756 655 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 TUSC1Q2TAM9 212 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 CTRB2Q6GPI1 263 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 DBX1A6NMT0 343 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 C17orf98A8MV24 154 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 KHDC3LQ587J8 217 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 C7orf77A4D0Y5 90 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 CXorf1O96002 111 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 ZNF497Q6ZNH5 498 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 OR8I2Q8N0Y5 310 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 PERPQ96FX8 193 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 MSRB2Q9Y3D2 182 aa10.31□□□□□ -0.76
GABPB1-203ENST00000380877 GALR1P47211 349 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 NHLRC3Q5JS37 347 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 SIGIRRQ6IA17 410 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 TLNRD1Q9H1K6 362 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 C20orf202A1L168 122 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 FAM106CPP0CH98 169 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 MPZP25189 248 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 MEF2CQ06413 473 aaPredicted RBP10.3□□□□□ -0.76
GABPB1-203ENST00000380877 LAMTOR1Q6IAA8 161 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 STXBP6Q8NFX7 210 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 GRAMD2BQ96HH9 432 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 F8VVB4 439 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 F8VWA3 439 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 GOSR1O95249 250 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 NEU4Q8WWR8 484 aaPredicted RBP10.3□□□□□ -0.76
GABPB1-203ENST00000380877 QTRT1Q9BXR0 403 aaKnown RBP10.3□□□□□ -0.76
GABPB1-203ENST00000380877 FAM157CP0CG43 387 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 BCL2P10415 239 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 BMI1P35226 326 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 ISOC2Q96AB3 205 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 LINC00312Q9Y6C7 94 aa10.3□□□□□ -0.76
GABPB1-203ENST00000380877 DOCK10Q96BY6 2186 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 TRBV23-1A0A0A0MS06 115 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 PIMREGQ9BSJ6 248 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 TOLLIPQ9H0E2 274 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 WDR87Q6ZQQ6 2873 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 SPG11Q96JI7 2443 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 H3BQ15 152 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 IGHV1-46P01743 117 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 PDLIM4P50479 330 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 FAM216AQ8WUB2 273 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 CORTO00230 105 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 LILRA1O75019 489 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 NTF3P20783 257 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 SELENOTP62341 195 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 LY6G6FQ5SQ64 297 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 MIC13Q5XKP0 118 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 SH3BGRL3Q9H299 93 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 SMDT1Q9H4I9 107 aa10.29□□□□□ -0.76
GABPB1-203ENST00000380877 SERTM2A0A1B0GWG4 89 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 IGSF23A1L1A6 192 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 GATCO43716 136 aaKnown RBP10.28□□□□□ -0.76
GABPB1-203ENST00000380877 SPINK4O60575 86 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 LINC00869P0C866 280 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 CCL3L1P16619 93 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 DLK1P80370 383 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 MBNL2Q5VZF2 373 aaKnown RBP10.28□□□□□ -0.76
GABPB1-203ENST00000380877 TRAV14DV4A0A0A6YYC5 116 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 NBL1P41271 181 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 RND2P52198 227 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.28□□□□□ -0.76
GABPB1-203ENST00000380877 PRSS33Q8NF86 280 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 FAM222BQ8WU58 562 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 COL4A4P53420 1690 aaPredicted RBP10.28□□□□□ -0.76
GABPB1-203ENST00000380877 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 PDE6DO43924 150 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 HYPMO75409 117 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 QRFPP83859 136 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 ZNF146Q15072 292 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 Q9UFV3 132 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 TMEM56-RWDD3S4R434 201 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 RNF222A6NCQ9 220 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 FOXH1O75593 365 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms