RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 CT62P0C5K7 136 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 FHL5Q5TD97 284 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 CENPVQ7Z7K6 275 aaPredicted RBP9.31□□□□□ -0.92
CLCN4-202ENST00000380833 DUX5Q96PT3 197 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 IMMP2LQ96T52 175 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 CCL13Q99616 98 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 TRAV21A0A0B4J279 112 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 TSPOP30536 169 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 LHX2P50458 406 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 WDR38Q5JTN6 314 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
CLCN4-202ENST00000380833 A0A1B0GTL3 188 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM258P61165 79 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 SPSB1Q96BD6 273 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 NUP205Q92621 2012 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 C16orf97H3BN30 126 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 CBLN3Q6UW01 205 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 MVB12AQ96EY5 273 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 SH3BGRL3Q9H299 93 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV5-10-1A0A0J9YXX1 117 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 CTGFP29279 349 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 HBBP68871 147 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 FXYD3Q14802 87 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 PQLC2Q6ZP29 291 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 OTOSQ8NHW6 89 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 PP6455Q8WZ26 134 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 K7EP13 123 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 HRKO00198 91 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM50BP56557 158 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 SPANXN1Q5VSR9 72 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 LINC01560Q8TB33 94 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 SLC25A10Q9UBX3 287 aaPredicted RBP9.3□□□□□ -0.92
CLCN4-202ENST00000380833 CA11O75493 328 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 EPPINO95925 133 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 GZMBP10144 247 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 SLC25A53Q5H9E4 307 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 CRYGNQ8WXF5 182 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 C16orf92Q96LL3 132 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 S4R3C0 116 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
CLCN4-202ENST00000380833 TRBV20-1A0A075B6N2 111 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 A0A0A6YYD5 115 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 HERV-K104P63124 156 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ZNF585BQ52M93 769 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 KRTCAP3Q53RY4 240 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 C1QL3Q5VWW1 255 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 MS4A5Q9H3V2 200 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 SDF2L1Q9HCN8 221 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 GLI3P10071 1580 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 TTC3P53804 2025 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV3-49A0A0A0MS15 119 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 PLPP3O14495 311 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 THY1P04216 161 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 HCP5Q6MZN7 132 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 METTL26Q96S19 204 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 PSMB11A5LHX3 300 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ASPDHA6ND91 283 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 REG1AP05451 166 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ZFP36L2P47974 494 aaKnown RBP9.29□□□□□ -0.92
CLCN4-202ENST00000380833 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 PLPPR1Q8TBJ4 325 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ABHD14BQ96IU4 210 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ZNF714Q96N38 554 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 SLC52A3Q9NQ40 469 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 LILRA5A6NI73 299 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 C1QTNF9P0C862 333 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ZP1P60852 638 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 ERVK11-1P61568 191 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 MPV17L2Q567V2 206 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 SLC23A3Q6PIS1 610 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 CYP2G1PQ6ZSU1 146 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 TCF24Q7RTU0 167 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 RGPD5Q99666 1765 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 NXPH1P58417 271 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 NAA38Q9BRA0 125 aaKnown RBP9.29□□□□□ -0.92
CLCN4-202ENST00000380833 PDFQ9HBH1 243 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 SYNGR1O43759 233 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 SLC25A1P53007 311 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 PSG3Q16557 428 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
CLCN4-202ENST00000380833 SCN3AQ9NY46 2000 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
CLCN4-202ENST00000380833 ATXN8Q156A1 80 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 GPR27Q9NS67 375 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 RNF7Q9UBF6 113 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 H3BTX0 84 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 RSPO4Q2I0M5 234 aaPredicted RBP9.28□□□□□ -0.92
CLCN4-202ENST00000380833 PIGYQ3MUY2 71 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 C1orf174Q8IYL3 243 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 LINC01387J3KSC0 135 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 CRYBA4P53673 196 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 MDP1Q86V88 176 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 PRELID3AQ96N28 172 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 HMGA2P52926 109 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms