RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CLEC2DQ9UHP7 191 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 PNMA8CA0A1B0GUJ8 204 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 PRSS29PA6NIE9 313 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 CRYZL1O95825 349 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 CD3GP09693 182 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 UBBP0CG47 229 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 C8orf88P0DMB2 117 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 C1orf146Q5VVC0 180 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 GGHQ92820 318 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-203ENST00000380748 RARRES2Q99969 163 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
HMGN1-203ENST00000380748 ZNF257Q9Y2Q1 563 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 HERC1Q15751 4861 aa12.74□□□□□ -0.37
HMGN1-203ENST00000380748 ACTL6BO94805 426 aa12.73□□□□□ -0.37
HMGN1-203ENST00000380748 SAA1P0DJI8 122 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-203ENST00000380748 DCKP27707 260 aa12.73□□□□□ -0.37
HMGN1-203ENST00000380748 SLC25A42Q86VD7 318 aa12.73□□□□□ -0.37
HMGN1-203ENST00000380748 OR5B3Q8NH48 314 aa12.73□□□□□ -0.37
HMGN1-203ENST00000380748 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
HMGN1-203ENST00000380748 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
HMGN1-203ENST00000380748 TEX22C9J3V5 150 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 RTL8CO15255 209 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 DEFB4AO15263 64 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 SOCS1O15524 211 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 RRASP10301 218 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 MED22Q15528 200 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 MARC2Q969Z3 335 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 FANCD2OSQ96PS1 177 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 C5orf66Q9H5L9 145 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 C12orf4Q9NQ89 552 aa12.72□□□□□ -0.37
HMGN1-203ENST00000380748 IGHV3-35A0A0C4DH35 117 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 TSPAN4O14817 238 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
HMGN1-203ENST00000380748 SRMP19623 302 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 MFAP2P55001 183 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 CDK10Q15131 360 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 CBR4Q8N4T8 237 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 ZNF485Q8NCK3 441 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 EEF1AKMT3Q96AZ1 226 aa12.71□□□□□ -0.37
HMGN1-203ENST00000380748 MRPL27Q9P0M9 148 aaKnown RBP12.71□□□□□ -0.37
HMGN1-203ENST00000380748 LINC00473A8K010 186 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 NPIPB5A8MRT5 1133 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 BET1O15155 118 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 MYL12AP19105 171 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 QRFPP83859 136 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 MED21Q13503 144 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 OR11H2Q8NH07 326 aa12.7□□□□□ -0.38
HMGN1-203ENST00000380748 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-203ENST00000380748 A0A1B0GW64 132 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 DPPA5A6NC42 116 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 MFSD2BA6NFX1 497 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 E7EUB6 86 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 CREBL2O60519 120 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-203ENST00000380748 CLEC3BP05452 202 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 IL6RP08887 468 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-203ENST00000380748 AREGP15514 252 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 DUTP33316 252 aaKnown RBP12.69□□□□□ -0.38
HMGN1-203ENST00000380748 ZNF124Q15973 351 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 APRG1Q8IVJ8 170 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 CD300LFQ8TDQ1 290 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 PYDC1Q8WXC3 89 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 LPAR5Q9H1C0 372 aa12.69□□□□□ -0.38
HMGN1-203ENST00000380748 DIMT1Q9UNQ2 313 aaKnown RBP12.69□□□□□ -0.38
HMGN1-203ENST00000380748 LOC100130705A0A1B0GUX0 176 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 ATP8B1O43520 1251 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 GALP22466 123 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 SERPINB10P48595 397 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 TPBGQ13641 420 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 INSL4Q14641 139 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 IGSF11Q5DX21 431 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 LRRTM1Q86UE6 522 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 SETD9Q8NE22 299 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 FYTTD1Q96QD9 318 aaKnown RBP12.68□□□□□ -0.38
HMGN1-203ENST00000380748 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
HMGN1-203ENST00000380748 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
HMGN1-203ENST00000380748 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-203ENST00000380748 MPTX1A8MV57 137 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 FABP7O15540 132 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 GPR183P32249 361 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 ELLP55199 621 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-203ENST00000380748 VKORC1L1Q8N0U8 176 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 OR4A4PQ8NGN8 299 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 ARHGAP5-AS1Q96IT6 56 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 ADTRPQ96IZ2 230 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 HSF4Q9ULV5 492 aa12.67□□□□□ -0.38
HMGN1-203ENST00000380748 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
HMGN1-203ENST00000380748 CRYGCP07315 174 aa12.66□□□□□ -0.38
HMGN1-203ENST00000380748 MYOD1P15172 320 aa12.66□□□□□ -0.38
HMGN1-203ENST00000380748 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-203ENST00000380748 PSMB6P28072 239 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms