RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 OR9G4Q8NGQ1 327 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 SDHCQ99643 169 aaPredicted RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 TMEM74BQ9NUR3 256 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 GPR132Q9UNW8 380 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 NBASA2RRP1 2371 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 A0A0A6YYD5 115 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 KBTBD11-OT1A0A1B0GTJ5 212 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 FXYD3Q14802 87 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 ATXN8Q156A1 80 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 C3AR1Q16581 482 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 PMS2CLQ68D20 193 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 MARVELD1Q9BSK0 173 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 CBLN4Q9NTU7 201 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 PKDREJQ9NTG1 2253 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 IGHV3OR16-13A0A075B7E8 117 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 IGHV3-74A0A0B4J1X5 117 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 SPINT1O43278 529 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 PNLIPP16233 465 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 MDKP21741 143 aaPredicted RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 HOXD3P31249 432 aaPredicted RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 HIST1H4AP62805 103 aaKnown RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 ZNF146Q15072 292 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 FAM89BQ8N5H3 189 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 ZNF488Q96MN9 340 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 WDFY2Q96P53 400 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 AKIP1Q9NQ31 210 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 IL36RNQ9UBH0 155 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 CLDN16Q9Y5I7 305 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 CROCCQ5TZA2 2017 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 ALPK2Q86TB3 2170 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 ACACAQ13085 2346 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 AHRRA9YTQ3 701 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 ETHE1O95571 254 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 UNC119Q13432 240 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 TMEM30BQ3MIR4 351 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 Q5PR19 223 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 DCAF10Q5QP82 559 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 COX11Q9Y6N1 276 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 TRBV9A0A0B4J1U6 114 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 SPAARA0A1B0GVQ0 90 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 CEACAM8P31997 349 aaPredicted RBP9.18□□□□□ -0.94
RTN3-206ENST00000377819 OR10J3Q5JRS4 329 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 TMEM252Q8N6L7 170 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 TPRX1Q8N7U7 411 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 OR11H4Q8NGC9 324 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 OR13A1Q8NGR1 328 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 TMEM186Q96B77 213 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 ANAPC13Q9BS18 74 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 DERL1Q9BUN8 251 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 A0A1W2PP11 408 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 AGAP20933 346 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 ZNF818PQ6ZRF7 136 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 ITLN1Q8WWA0 313 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 MGST2Q99735 147 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 CLEC7AQ9BXN2 247 aa9.18□□□□□ -0.94
RTN3-206ENST00000377819 PITX3O75364 302 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 TGFAP01135 160 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 HBDP02042 147 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 LINC00158P58513 81 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 MIC13Q5XKP0 118 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 FAM214BQ7L5A3 538 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 ZNF98A6NK75 572 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 GPR183P32249 361 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 TSPAN7P41732 249 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 TMPRSS3P57727 454 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 STHQ8IWL8 128 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 ABHD12Q8N2K0 398 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 TMEM54Q969K7 222 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 COL1A1P02452 1464 aaPredicted RBP9.17□□□□□ -0.94
RTN3-206ENST00000377819 TCHHQ07283 1943 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 LIPT2A6NK58 231 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 MPZL1O95297 269 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 CD69Q07108 199 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 C16orf47Q6ZP98 133 aaPredicted RBP9.17□□□□□ -0.94
RTN3-206ENST00000377819 ABHD17AQ96GS6 310 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 RIF1Q5UIP0 2472 aaKnown RBP9.17□□□□□ -0.94
RTN3-206ENST00000377819 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 PAX1P15863 534 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 CBLN3Q6UW01 205 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 C5orf30Q96GV9 206 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 PKIBQ9C010 78 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 TLNRD1Q9H1K6 362 aa9.17□□□□□ -0.94
RTN3-206ENST00000377819 FER1L6Q2WGJ9 1857 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 LDLRAD4O15165 306 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
RTN3-206ENST00000377819 IL6RP08887 468 aaPredicted RBP9.16□□□□□ -0.94
RTN3-206ENST00000377819 CRYBB3P26998 211 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 SELENOHQ8IZQ5 122 aaKnown RBP9.16□□□□□ -0.94
RTN3-206ENST00000377819 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 PARP14Q460N5 1801 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms