RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 LHX9Q9NQ69 397 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 HLA-DRB4X5D2U9 266 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 A0A1W2PQF6 199 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 IGLON5A6NGN9 336 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 FAM90A20PA6NIJ5 464 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 MOSP00540 346 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 FUSP35637 526 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 SP6Q3SY56 376 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 C1orf174Q8IYL3 243 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 CLDN19Q8N6F1 224 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 OR11G2Q8NGC1 345 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 CHTOPQ9Y3Y2 248 aaKnown RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 PRB2P02812 416 aaPredicted RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 ATP5G1P05496 136 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 PYYP10082 97 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 ATP5G3P48201 142 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 ATP5G2Q06055 141 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 WFDC3Q8IUB2 231 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 PLEKHB2Q96CS7 222 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 SLC25A39Q9BZJ4 359 aaPredicted RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 PELI2Q9HAT8 420 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 TSSC4Q9Y5U2 329 aaPredicted RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 ARAP3Q8WWN8 1544 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 ADAMTS12P58397 1594 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 A8MWP6 167 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 ISL1P61371 349 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 SMAD2Q15796 467 aaKnown RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 NPIPB3Q92617 1050 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 APOBEC3DQ96AK3 386 aaPredicted RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 RBPJLQ9UBG7 517 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 SONP18583 2426 aaKnown RBP5.16□□□□□ -1.58
SCN2A-202ENST00000375427 C15orf62A8K5M9 175 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 MKRN2OSH3BPM6 223 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 NDUFB1O75438 58 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 IL1RNP18510 177 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 CENPWQ5EE01 88 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 RPRMLQ8N4K4 120 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 APIPQ96GX9 242 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 EGLN2Q96KS0 407 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 PRSS21Q9Y6M0 314 aa5.16□□□□□ -1.58
SCN2A-202ENST00000375427 PRR36Q9H6K5 1346 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 TCRBV7S2A1N4TA0A589 114 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 PCMT1P22061 227 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 FAM90A1Q86YD7 464 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 STARD5Q9NSY2 213 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 R4GMQ9 66 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 ATP10BO94823 1461 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 TRAV23DV6A0A075B6W5 121 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 CXorf49A8MYA2 514 aaPredicted RBP5.15□□□□□ -1.58
SCN2A-202ENST00000375427 FAM90A26D6RGX4 464 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 JMJD7-PLA2G4BH0Y9G9 81 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 FAM106CPP0CH98 169 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 FAM106AQ4KMX7 169 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 FAM90A2PQ658T7 463 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 MDS2Q8NDY4 140 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 FAM57AQ8TBR7 257 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 SPSB1Q96BD6 273 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 SMIM8Q96KF7 97 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 SLC50A1Q9BRV3 221 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 RNF126Q9BV68 326 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 ID4P47928 161 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 SPINK9Q5DT21 86 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 BCL6BQ8N143 479 aaPredicted RBP5.15□□□□□ -1.58
SCN2A-202ENST00000375427 NAT6Q93015 286 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 GLIPR2Q9H4G4 154 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 SDF2L1Q9HCN8 221 aa5.15□□□□□ -1.58
SCN2A-202ENST00000375427 SF3B6Q9Y3B4 125 aaKnown RBP5.15□□□□□ -1.58
SCN2A-202ENST00000375427 TRGV11A0A075B6L2 103 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 KIR3DS1Q14943 382 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 ASCL5Q7RTU5 278 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 IRF2BP2Q7Z5L9 587 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 FUBP1Q96AE4 644 aaKnown RBP5.15□□□□□ -1.59
SCN2A-202ENST00000375427 JMJD8Q96S16 334 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 SHISA9B4DS77 424 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 NANOS2P60321 138 aaKnown RBP5.15□□□□□ -1.59
SCN2A-202ENST00000375427 FAM104BQ5XKR9 115 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 DEFB118Q96PH6 123 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 TRAV25A0A0B4J276 109 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 RNASE2P10153 161 aaKnown RBP5.15□□□□□ -1.59
SCN2A-202ENST00000375427 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 ZNF146Q15072 292 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 CCDC144NLQ6NUI1 221 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 C3orf22Q8N5N4 141 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 DEFB108BQ8NET1 73 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 CYB5D2Q8WUJ1 264 aa5.15□□□□□ -1.59
SCN2A-202ENST00000375427 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 CRLF1O75462 422 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 MMD2Q8IY49 270 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 NOXO1Q8NFA2 376 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 HAPLN2Q9GZV7 340 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 NAV1Q8NEY1 1877 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 TSPAN7P41732 249 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 ZNF117Q03924 483 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 PDXPQ96GD0 296 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 MRGPRX3Q96LB0 322 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 A4GALTQ9NPC4 353 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 LINC00527Q9UJ94 153 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 NLRP1Q9C000 1473 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 IGHV5-51A0A0C4DH38 117 aa5.14□□□□□ -1.59
SCN2A-202ENST00000375427 ZAR1LA6NP61 321 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms