RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 JPT1Q9UK76 154 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 A6NDN8 102 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 NUBP1P53384 320 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 LCN2P80188 198 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 SLC25A53Q5H9E4 307 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 OR10S1Q8NGN2 331 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 ZNF71Q9NQZ8 489 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 GBGT1Q8N5D6 347 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 CLDND2Q8NHS1 167 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 SNRNP40Q96DI7 357 aaKnown RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 ZNF714Q96N38 554 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 RBM14Q96PK6 669 aaKnown RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 REG4Q9BYZ8 158 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 CLEC5AQ9NY25 188 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 HIGD1AQ9Y241 93 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 F5H697 171 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 M0QZ24 198 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 CBLN1P23435 193 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 SSX8Q7RTT4 187 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 PRNTQ86SH4 94 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 VKORC1L1Q8N0U8 176 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 CDX2Q99626 313 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 REPIN1Q9BWE0 567 aaKnown RBP9.82□□□□□ -0.84
PTCH1-203ENST00000375274 RAB1BQ9H0U4 201 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 TMEM56-RWDD3S4R434 201 aa9.82□□□□□ -0.84
PTCH1-203ENST00000375274 PRR33A8MZF0 331 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 M0R296 226 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 STARD6P59095 220 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 RTP5Q14D33 572 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 TMUB1Q9BVT8 246 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 NPCDR1Q9BY65 106 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 SDF2L1Q9HCN8 221 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 DNAJC4Q9NNZ3 241 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 J3QW42 95 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 K7ERU9 68 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 SIAH2O43255 324 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 RHBDL1O75783 438 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 IGLV3-19P01714 112 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 CCL1P22362 96 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 RND2P52198 227 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 HCP5Q6MZN7 132 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 PPP1R32Q7Z5V6 425 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 NABP2Q9BQ15 211 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 ZNF430Q9H8G1 570 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-203ENST00000375274 C1RLQ9NZP8 487 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 PILRBQ9UKJ0 227 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 A0A0A6YYD4 124 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 SOD3P08294 240 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 MC5RP33032 325 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 LGALS7P47929 136 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 SFXN3Q9BWM7 321 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 OPN3Q9H1Y3 402 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-203ENST00000375274 COA4Q9NYJ1 87 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 IGKV1D-8A0A087WSZ0 117 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 GCHFRP30047 84 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 RPL30P62888 115 aaKnown RBP9.81□□□□□ -0.84
PTCH1-203ENST00000375274 SLC35E4Q6ICL7 350 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 SLC25A33Q9BSK2 321 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 C1QTNF5Q9BXJ0 243 aa9.81□□□□□ -0.84
PTCH1-203ENST00000375274 TRBV6-7A0A0A0MS04 114 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 IGHV3-72A0A0B4J1Y9 119 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 DLL1O00548 723 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 FADS6Q8N9I5 356 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 OR8B3Q8NGG8 313 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 LEAP2Q969E1 77 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 OR8B2Q96RD0 313 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 SCNM1Q9BWG6 230 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 ZDHHC8Q9ULC8 765 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 SIP14410 1827 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 IGLV3-12A0A075B6K2 115 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 LOC102724200A0A096LPH7 203 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-203ENST00000375274 CD82P27701 267 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 RELBQ01201 579 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 FOXC1Q12948 553 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 LHFPL1Q86WI0 220 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 DOLPP1Q86YN1 238 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 ZNF525Q8N782 197 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 ZDHHC16Q969W1 377 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 GRAMD2BQ96HH9 432 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 TNFRSF19Q9NS68 423 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 CDC42EP3Q9UKI2 254 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 AHRRA9YTQ3 701 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 GOSR1O95249 250 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 CTSSP25774 331 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 FAM166AQ6J272 317 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 SHISA5Q8N114 240 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 STPG3Q8N7X2 389 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 IGKV1D-13A0A0B4J2D9 117 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 SPAARA0A1B0GVQ0 90 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 WNT9BO14905 357 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 LDLRAD4O15165 306 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 CD5P06127 495 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 IGKV1-13P0DP09 117 aa9.8□□□□□ -0.84
PTCH1-203ENST00000375274 GATAD1Q8WUU5 269 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 334.8 ms