RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 RHOVQ96L33 236 aa12.69□□□□□ -0.38
NIPAL3-204ENST00000374399 TBX15Q96SF7 602 aa12.69□□□□□ -0.38
NIPAL3-204ENST00000374399 PCGF1Q9BSM1 259 aa12.69□□□□□ -0.38
NIPAL3-204ENST00000374399 TMEM140Q9NV12 185 aa12.69□□□□□ -0.38
NIPAL3-204ENST00000374399 FAM24AA6NFZ4 105 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 FAM90A9PA6NNJ1 464 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 IL3RAP26951 378 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 RTL8BQ17RB0 113 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 TMEM177Q53S58 311 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 DHRS7BQ6IAN0 325 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 OR4A47Q6IF82 309 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 ZNF680Q8NEM1 530 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 RITA1Q96K30 269 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 QTRT1Q9BXR0 403 aaKnown RBP12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 CELSR1Q9NYQ6 3014 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 IGSF23A1L1A6 192 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 SYNGR2O43760 224 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 ARG1P05089 322 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 DVL1P1P54792 670 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 DSCR9P59020 149 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 CLEC12BQ2HXU8 276 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 OR2C3Q8N628 320 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 OR8H1Q8NGG4 311 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 LPAR2Q9HBW0 351 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 LYRM2Q9NU23 88 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
NIPAL3-204ENST00000374399 IGHV1-3A0A0C4DH29 117 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 C4BPBP20851 252 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 ARHGDIBP52566 201 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 OR2B8PP59922 312 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 LHFPL4Q7Z7J7 247 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 PDPNQ86YL7 162 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 PDZD9Q8IXQ8 264 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 AJUBAQ96IF1 538 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 ARPC5LQ9BPX5 153 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 RBKSQ9H477 322 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 NAV2Q8IVL1 2488 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 CSMD1Q96PZ7 3565 aa12.67□□□□□ -0.38
NIPAL3-204ENST00000374399 IGHV3-72A0A0B4J1Y9 119 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 WRBO00258 174 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 GPR137BO60478 399 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 APOA2P02652 100 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 RRASP10301 218 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 IAPPP10997 89 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 UBE2KP61086 200 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 NHLH2Q02577 135 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 PAX8Q06710 450 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 EXOSC2Q13868 293 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 GPR157Q5UAW9 335 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 SLC51BQ86UW2 128 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 PUSL1Q8N0Z8 303 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 TMEM252Q8N6L7 170 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 OSR1Q8TAX0 266 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 LHX4Q969G2 390 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 BEX4Q9NWD9 120 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 WASHC3Q9Y3C0 194 aa12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 AMMECR1Q9Y4X0 333 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-204ENST00000374399 H7C2Y5 167 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 TOX4O94842 621 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 HRASP01112 189 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 GAPDHP04406 335 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 SAA1P0DJI8 122 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 PAX6P26367 422 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 ERVK-16P61578 105 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 EWSR1Q01844 656 aaKnown RBP eCLIP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 DEFB113Q30KQ7 82 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 PDLIM3Q53GG5 364 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 DYNAPQ8N1N2 210 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 C17orf50Q8WW18 174 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 FBXL17Q9UF56 701 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 WSB1Q9Y6I7 421 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 A0A1W2PRD5 423 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 A0A1W2PRF3 423 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 A0A1W2PRM7 423 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 TXNL1O43396 289 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 MYOD1P15172 320 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 PVALBP20472 110 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 HTR1DP28221 377 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 NUP62P37198 522 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 SPINK9Q5DT21 86 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 ZNF429Q86V71 674 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 KRTAP1-3Q8IUG1 177 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 ST8SIA2Q92186 375 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 FLYWCH2Q96CP2 140 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 TMEM14BQ9NUH8 114 aa12.65□□□□□ -0.38
NIPAL3-204ENST00000374399 DPM3Q9P2X0 92 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms