RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 ATP5G2Q06055 141 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 ACSF3Q4G176 576 aaPredicted RBP12.27□□□□□ -0.45
TRAF1-201ENST00000373887 CXorf66Q5JRM2 361 aaPredicted RBP12.27□□□□□ -0.45
TRAF1-201ENST00000373887 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 STPG3Q8N7X2 389 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 RBM38Q9H0Z9 239 aaKnown RBP12.27□□□□□ -0.45
TRAF1-201ENST00000373887 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 HLA-DQA1P01909 254 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 SERF2P84101 59 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 FAM27E3Q08E93 113 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 FAM209AQ5JX71 171 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 ST6GALNAC2Q9UJ37 374 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 TRIOBPQ9H2D6 2365 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 IGHV3OR16-13A0A075B7E8 117 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 IGHV3-74A0A0B4J1X5 117 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 H0Y980 276 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 PEAR1Q5VY43 1037 aaPredicted RBP12.26□□□□□ -0.45
TRAF1-201ENST00000373887 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 WFDC6Q9BQY6 131 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 KCNK7Q9Y2U2 307 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 A0A1W2PP11 408 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 NANOS3P60323 173 aaKnown RBP12.26□□□□□ -0.45
TRAF1-201ENST00000373887 HIST1H1AQ02539 215 aaPredicted RBP12.26□□□□□ -0.45
TRAF1-201ENST00000373887 SSBP3Q9BWW4 388 aaPredicted RBP12.26□□□□□ -0.45
TRAF1-201ENST00000373887 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 FOXI3A8MTJ6 420 aaPredicted RBP12.26□□□□□ -0.45
TRAF1-201ENST00000373887 ASAH2BP0C7U1 165 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 TMEM252Q8N6L7 170 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 UNC119Q13432 240 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 MBD3L1Q8WWY6 194 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 SPSB2Q99619 263 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 MFAP4P55083 255 aa12.26□□□□□ -0.45
TRAF1-201ENST00000373887 CA11O75493 328 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 MEF2BQ02080 365 aaPredicted RBP12.25□□□□□ -0.45
TRAF1-201ENST00000373887 CEACAM21Q3KPI0 293 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 FUT5Q11128 374 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 FAM27BQ5VT28 67 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 ERGP11308 486 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 OR51M1Q9H341 326 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 A0A0G2JMM0 328 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 A0A1W2PPB8 328 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 A0A1W2PRS3 328 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 KIR3DP1A8MWS1 328 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 DDTP30046 118 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 FAM106AQ4KMX7 169 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 TUBD1Q9UJT1 453 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 SCN2AQ99250 2005 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 A0A1B0GV90 55 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 S1PR2O95136 353 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 PF4P02776 101 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 MUC21Q5SSG8 566 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 KIR2DL4Q99706 377 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 CALYQ9NYX4 217 aa12.25□□□□□ -0.45
TRAF1-201ENST00000373887 PCP4P48539 62 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 GOLT1AQ6ZVE7 132 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 TAF15Q92804 592 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAF1-201ENST00000373887 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 C1QTNF9BB2RNN3 333 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 MGST3O14880 152 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 ZG16O60844 167 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 PRSS23O95084 383 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
TRAF1-201ENST00000373887 GCSAMQ8N6F7 178 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 ST6GALNAC6Q969X2 333 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 GPR146Q96CH1 333 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 A0A0U1RQV5 110 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 LHFPL5Q8TAF8 219 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 IGHV3-49A0A0A0MS15 119 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 PTP4A3O75365 173 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 PGLYRP1O75594 196 aaPredicted RBP12.24□□□□□ -0.45
TRAF1-201ENST00000373887 AGAP20933 346 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 MC5RP33032 325 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
TRAF1-201ENST00000373887 FGF12P61328 243 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 IDI2-AS1Q9NZ38 188 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
TRAF1-201ENST00000373887 DXOO77932 396 aaKnown RBP12.23□□□□□ -0.45
TRAF1-201ENST00000373887 AMELYQ99218 206 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 SIRT4Q9Y6E7 314 aaPredicted RBP12.23□□□□□ -0.45
TRAF1-201ENST00000373887 S4R3C0 116 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 MPV17P39210 176 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 C10orf128Q5T292 105 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 CENPVQ7Z7K6 275 aaPredicted RBP12.23□□□□□ -0.45
TRAF1-201ENST00000373887 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
TRAF1-201ENST00000373887 TMEM101Q96IK0 257 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 DNAJC4Q9NNZ3 241 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 TRBV5-3A0A0A0MS03 114 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 IGKV3D-20A0A0C4DH25 116 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 QTRT1Q9BXR0 403 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms