RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 ANAPC10Q9UM13 185 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 MED12LQ86YW9 2145 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 ANAPC1Q9H1A4 1944 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 WFDC2Q14508 124 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 ABHD17BQ5VST6 288 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 ODF3L1Q8IXM7 274 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 NGBQ9NPG2 151 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 R4GMQ9 66 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 PLXNA2O75051 1894 aa9.03□□□□□ -0.96
TRERF1-203ENST00000372917 SAA2-SAA4A0A096LPE2 208 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 REG1AP05451 166 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.96
TRERF1-203ENST00000372917 GNB1P62873 340 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 GNG3P63215 75 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 SHISA6Q6ZSJ9 500 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 MMD2Q8IY49 270 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 COX14Q96I36 57 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.96
TRERF1-203ENST00000372917 PKIBQ9C010 78 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 LIME1Q9H400 295 aa9.02□□□□□ -0.96
TRERF1-203ENST00000372917 LOC102723996A0A087X1L8 192 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
TRERF1-203ENST00000372917 SERF2P84101 59 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 EGR4Q05215 589 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 ACSM6Q6P461 480 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 BMPR1BO00238 502 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 DEFA4P12838 97 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 HLA-DOBP13765 273 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 ATP5G3P48201 142 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 ZNF585BQ52M93 769 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 CA13Q8N1Q1 262 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 DUSP23Q9BVJ7 150 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 ZNF391Q9UJN7 358 aa9.02□□□□□ -0.97
TRERF1-203ENST00000372917 H3BML4 177 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 MT-ATP8P03928 68 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 HHEXQ03014 270 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 CATR1Q13166 79 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 SAMD5Q5TGI4 173 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 SSX8Q7RTT4 187 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 ARPC1AQ92747 370 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 TECRQ9NZ01 308 aaKnown RBP9.01□□□□□ -0.97
TRERF1-203ENST00000372917 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
TRERF1-203ENST00000372917 C3orf85A0A1B0GTC6 90 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 IGKV1D-33P01593 117 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 IGKV1-33P01594 117 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 MGAT2Q10469 447 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 MYBPHQ13203 477 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 KIR2DS3Q14952 304 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 CEACAM16Q2WEN9 425 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 OR10G7Q8NGN6 311 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 VWCEQ96DN2 955 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 GNB1LQ9BYB4 327 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 ANXA10Q9UJ72 324 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 KNTC1P50748 2209 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 H0Y980 276 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 RPL18Q07020 188 aaKnown RBP9.01□□□□□ -0.97
TRERF1-203ENST00000372917 LRTM2Q8N967 370 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 OR4C3Q8NH37 302 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 SFXN3Q9BWM7 321 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 PPDPFQ9H3Y8 114 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 IL36GQ9NZH8 169 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 SHANK1Q9Y566 2161 aa9.01□□□□□ -0.97
TRERF1-203ENST00000372917 LGALS4P56470 323 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 TBR1Q16650 682 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 TM4SF20Q53R12 229 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 OCC1Q8TAD7 63 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 CTXND1A0A1B0GTU2 59 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 APCSP02743 223 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 FOXE3Q13461 319 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 TRAT1Q6PIZ9 186 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 FREM3P0C091 2139 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 TMEM189A5PLL7 270 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 FAM90A27PA6NNH2 459 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 OR1D4P47884 311 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 INSL3P51460 131 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 DLX2Q07687 328 aaPredicted RBP9□□□□□ -0.97
TRERF1-203ENST00000372917 SLC23A3Q6PIS1 610 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 LYPD6Q86Y78 171 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 OR52N5Q8NH56 324 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 RAB40CQ96S21 281 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 NUDT22Q9BRQ3 303 aa9□□□□□ -0.97
TRERF1-203ENST00000372917 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
TRERF1-203ENST00000372917 DNAJB12Q9NXW2 375 aaKnown RBP9□□□□□ -0.97
TRERF1-203ENST00000372917 TRBV9A0A0B4J1U6 114 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 DEGS1O15121 323 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 KLF7O75840 302 aaPredicted RBP8.99□□□□□ -0.97
TRERF1-203ENST00000372917 UTS2O95399 124 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 MT-ND6P03923 174 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 Q6ZSR6 202 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 SYT8Q8NBV8 401 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 C18orf32Q8TCD1 76 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 LSM10Q969L4 123 aaKnown RBP8.99□□□□□ -0.97
TRERF1-203ENST00000372917 SH2D7A6NKC9 451 aaPredicted RBP8.99□□□□□ -0.97
TRERF1-203ENST00000372917 CT62P0C5K7 136 aa8.99□□□□□ -0.97
TRERF1-203ENST00000372917 DOK3Q7L591 496 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms