RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 A0A0A6YYD4 124 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 A0A0G2JMM0 328 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 TRBV7-9A0A0J9YWB2 115 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 A0A1W2PPB8 328 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 KIR3DP1A8MWS1 328 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 NUDT3O95989 172 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 LINC00869P0C866 280 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 IGLL1P15814 213 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 AMTP48728 403 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 DYNLT3P51808 116 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 RHOBP62745 196 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 ADIPOQQ15848 244 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 CD300EQ496F6 205 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-203ENST00000372232 C19orf54Q5BKX5 351 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 PLAC9Q5JTB6 97 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 KCTD18Q6PI47 426 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-203ENST00000372232 LCN15Q6UWW0 184 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 LYZL2Q7Z4W2 148 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 KCNS1Q96KK3 526 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 RPRMQ9NS64 109 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 SLC7A10Q9NS82 523 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 HIF1ANQ9NWT6 349 aa7.46□□□□□ -1.21
ATG4A-203ENST00000372232 SPAARA0A1B0GVQ0 90 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NPIPB13A6NJU9 1138 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NPIPB4C9JG80 1138 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NPIPA5E9PKD4 350 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 K7EP34 96 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 PSPNO60542 156 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF737O75373 536 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 RAD51DO75771 328 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 ZFAND5O76080 213 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF728P0DKX0 622 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NPBWR2P48146 333 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 THBS3P49746 956 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 DAP3P51398 398 aaKnown RBP7.46□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF133P52736 654 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-203ENST00000372232 RRADP55042 308 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 PLP1P60201 277 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 ODF3L1Q8IXM7 274 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 STPG3Q8N7X2 389 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NAT6Q93015 286 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NPFFR1Q9GZQ6 430 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 OCIAD1Q9NX40 245 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 KLRF1Q9NZS2 232 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 NPIPA1Q9UND3 350 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 POLR1DQ9Y2S0 133 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 CACNA1CQ13936 2221 aa7.46□□□□□ -1.22
ATG4A-203ENST00000372232 TRAV9-1A0A075B6T8 112 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 LIPT2A6NK58 231 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 EFNA2O43921 213 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 PTGDSP41222 190 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 SNU13P55769 128 aaKnown RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 SSBP2P81877 361 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 MRPS34P82930 218 aaKnown RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 FAM69BQ5VUD6 431 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 OR10G3Q8NGC4 313 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 OR52N5Q8NH56 324 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 OR2AE1Q8NHA4 323 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 ABHD14BQ96IU4 210 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 SPATA25Q9BR10 227 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 CHRDL1Q9BU40 450 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 LINC00470Q9BZP3 86 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 C7orf69Q9H7B7 122 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 NAA60Q9H7X0 242 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 AKIRIN1Q9H9L7 192 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 MED29Q9NX70 200 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 JPT1Q9UK76 154 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 IGLV3-32A0A0A0MS00 114 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 TMEM189A5PLL7 270 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF324O75467 553 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 CA2P00918 260 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 OMGP23515 440 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 LTC4SQ16873 150 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 KIAA1644Q3SXP7 199 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 SLC25A53Q5H9E4 307 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 OR10J3Q5JRS4 329 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 MRPL54Q6P161 138 aaKnown RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 INO80CQ6PI98 192 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 ATOH7Q8N100 152 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 SLC22A24Q8N4F4 322 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 KCNG3Q8TAE7 436 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 MRPL30Q8TCC3 161 aaKnown RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 METTL7AQ9H8H3 244 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 ALKBH4Q9NXW9 302 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 C19orf25Q9UFG5 118 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-203ENST00000372232 HHLA2Q9UM44 414 aa7.45□□□□□ -1.22
ATG4A-203ENST00000372232 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.44□□□□□ -1.22
ATG4A-203ENST00000372232 IGKV1D-43A0A0B4J1Z2 117 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 LOC102725191A0A1B0GVB3 256 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 A0A1W2PR80 420 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 A0A1W2PS18 150 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 E9PLN8 166 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SRSF10O75494 262 aaKnown RBP7.44□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF823P16415 610 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SRD5A2P31213 254 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 MLF1P58340 268 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 TRAT1Q6PIZ9 186 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 WDR5BQ86VZ2 330 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 OR5P3Q8WZ94 311 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms