RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 BAGE2Q86Y30 109 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 ZPBPQ9BS86 351 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 MMP17Q9ULZ9 603 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 H0YJW9 148 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 SPINK4O60575 86 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF253O75346 499 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 NGFP01138 241 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 LIFP15018 202 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 IGLL1P15814 213 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF16P17020 682 aaPredicted RBP9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 KITLGP21583 273 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 CARD18P57730 90 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 SLC35B1P78383 322 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 MRPS21P82921 87 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 MUC15Q8N387 334 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 URB1-AS1Q96HZ7 61 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 PRDM14Q9GZV8 571 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 R4GN57 208 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 LAMA5O15230 3695 aa9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 PRRC2CQ9Y520 2896 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-201ENST00000371121 S100A7P31151 101 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 ZXDAP98168 799 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 DCAF12Q5T6F0 453 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 GDF5OSQ5U4N7 250 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 MRGPRDQ8TDS7 321 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 PLPPR2Q96GM1 343 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 ZC2HC1AQ96GY0 325 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 MGST2Q99735 147 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 GNB1LQ9BYB4 327 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF391Q9UJN7 358 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 WDR83OSQ9Y284 106 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 DPRXA6NFQ7 191 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 C17orf98A8MV24 154 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF324O75467 553 aaPredicted RBP9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 STAG3L2P0CL84 134 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 STAG3L3P0CL85 134 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 RPL31P62899 125 aaKnown RBP9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 SUMO1P63165 101 aaKnown RBP9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF90Q03938 601 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 CEACAM16Q2WEN9 425 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 SPATA46Q5T0L3 261 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 WDR86Q86TI4 376 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 MMD2Q8IY49 270 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 CPT1CQ8TCG5 803 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 FOXB1Q99853 325 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 SAMD10Q9BYL1 202 aa9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.85
SMARCA1-201ENST00000371121 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 IGLV2-8P01709 118 aa9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 EDDM3BP56851 147 aa9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 SLAQ13239 276 aa9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF497Q6ZNH5 498 aa9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 SIGLECL1Q8N7X8 197 aa9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 SEPSECSQ9HD40 501 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-201ENST00000371121 SERPINA7P05543 415 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 HNRNPA3P51991 378 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 FAM120AOSQ5T036 256 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 VASH2Q86V25 355 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 POM121L2Q96KW2 1035 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 RNASE7Q9H1E1 156 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 CLEC1BQ9P126 229 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 C2orf70A6NJV1 201 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 LMO7DNF2Z398 122 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 PMCHP20382 165 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 TGFBR3Q03167 851 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF816Q0VGE8 651 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 Q8TCH9 128 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 EAF1Q96JC9 268 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 CD207Q9UJ71 328 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 RNF24Q9Y225 148 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 MDFIC2A0A1B0GVS7 189 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 LINC00473A8K010 186 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 VAMP5O95183 116 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 IGHV3-9P01782 118 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 AMTP48728 403 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 CX3CL1P78423 397 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 SLC35E4Q6ICL7 350 aa9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 MBNL3Q9NUK0 354 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-201ENST00000371121 RNF151Q2KHN1 245 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 FAM168AQ92567 244 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 OR2D2Q9H210 308 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 CHODLQ9H9P2 273 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 BOD1L1Q8NFC6 3051 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 IGHV1-69-2A0A0G2JMI3 117 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 REG1AP05451 166 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 CLDN18P56856 261 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 RELBQ01201 579 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 TXN2Q99757 166 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 MRPL27Q9P0M9 148 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 OR5B21A6NL26 309 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 PROP1O75360 226 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 ZFAND5O76080 213 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms