RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 RALYQ9UKM9 306 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 LINC00312Q9Y6C7 94 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 LRP4O75096 1905 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 F8VVB4 439 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 F8VWA3 439 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 FGF16O43320 207 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 PTBP3O95758 552 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 FBP1P09467 338 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 COMPP49747 757 aaPredicted RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 FHITP49789 147 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 RPL8P62917 257 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 RUNX1Q01196 453 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 MMD2Q8IY49 270 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 OR10A7Q8NGE5 316 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 OR4C13Q8NGP0 309 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 OR4C12Q96R67 309 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 GPR61Q9BZJ8 451 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 MSRB2Q9Y3D2 182 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A1B0GV90 55 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 CORTO00230 105 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 RBFOX2O43251 390 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 PDE6DO43924 150 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 CXorf1O96002 111 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 HSPB1P04792 205 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 BCL2P10415 239 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 CDX1P47902 265 aaPredicted RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 LGALS7P47929 136 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 FGF8P55075 233 aaPredicted RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 ACSM6Q6P461 480 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 IGFL2Q6UWQ7 119 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 STXBP6Q8NFX7 210 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 SIRT7Q9NRC8 400 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 CACNA1GO43497 2377 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 ADAMTS9Q9P2N4 1935 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 FER1L5A0AVI2 2057 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 DBX1A6NMT0 343 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 NPIPB11E5RHQ5 1161 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 KBTBD11O94819 623 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 TRGC2P03986 189 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 CT45A10P0DMU9 189 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 NTF4P34130 210 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF90Q03938 601 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 Q6ZSR3 168 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 BAGE3Q86Y29 109 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 BAGE2Q86Y30 109 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 OR1L6Q8NGR2 347 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 OSR1Q8TAX0 266 aaPredicted RBP4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 NEU4Q8WWR8 484 aaPredicted RBP4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 SNRNP40Q96DI7 357 aaKnown RBP4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 DMRTA2Q96SC8 542 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 TCF19Q9Y242 345 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 TIMM9Q9Y5J7 89 aa4.46□□□□□ -1.69
SMNDC1-202ENST00000369603 IGSF23A1L1A6 192 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 C11orf94C9JXX5 98 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 PROB1E7EW31 1015 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 LIPFP07098 398 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 OR10J4P0C629 311 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 MDKP21741 143 aaPredicted RBP4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 DDTP30046 118 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 RPL27AP46776 148 aaKnown RBP4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 SELENOTP62341 195 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 ID3Q02535 119 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 IQCJQ1A5X6 159 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 ABHD12Q8N2K0 398 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 CYB561D1Q8N8Q1 229 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 NUP37Q8NFH4 326 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM204Q9BSN7 226 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 RSG1Q9BU20 258 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF331Q9NQX6 463 aaPredicted RBP4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 RAXQ9Y2V3 346 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 CBY1Q9Y3M2 126 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 PPIAL4CA0A0B4J2A2 164 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 CXorf65A6NEN9 183 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 COLCA2A8K830 154 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 H0YIZ8 118 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 ZG16O60844 167 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 RBP4P02753 201 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 PPIAL4GP0DN37 164 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 PMS2P11Q13670 270 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 BSXQ3C1V8 233 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM78BQ5VT40 261 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 Q6P435 159 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM216BQ8N7L0 139 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 OR5B3Q8NH48 314 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 LINC01560Q8TB33 94 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 P2RX4Q99571 388 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 CLEC7AQ9BXN2 247 aa4.46□□□□□ -1.7
SMNDC1-202ENST00000369603 UBE2CO00762 179 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 IGHV1-46P01743 117 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 REG1BP48304 166 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 BIVMQ86UB2 503 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 PRSS33Q8NF86 280 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 OR4D5Q8NGN0 318 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 OR2T6Q8NHC8 308 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 SSMEM1Q8WWF3 244 aa4.45□□□□□ -1.7
SMNDC1-202ENST00000369603 GNB4Q9HAV0 340 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms