RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FAM110AQ9BQ89 295 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 DEFB127Q9H1M4 99 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 C13orf42A0A1B0GVH6 325 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 IGHV3-9P01782 118 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 IGLC1P0CG04 106 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 CD1BP29016 333 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 LINC01590Q5TEZ4 76 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 UNQ5815/PRO19632Q6UWF5 114 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 SGPP2Q8IWX5 399 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 PLPP7Q8NBV4 271 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 CHST4Q8NCG5 386 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 OR51A4Q8NGJ6 313 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 APH1AQ96BI3 265 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 SLC25A44Q96H78 314 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-204ENST00000369530 PNRC2Q9NPJ4 139 aaKnown RBP5.75□□□□□ -1.49
CSDE1-204ENST00000369530 FRRS1LQ9P0K9 344 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 MEIS3P1A6NDR6 274 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 CCL21O00585 134 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 SLC25A17O43808 307 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 ALOX5APP20292 161 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 QRFPP83859 136 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 SLAQ13239 276 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 MRPL21Q7Z2W9 205 aaKnown RBP5.75□□□□□ -1.49
CSDE1-204ENST00000369530 DEFB125Q8N687 156 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 OTOSQ8NHW6 89 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 MBD3L1Q8WWY6 194 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 SPSB1Q96BD6 273 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 SARAFQ96BY9 339 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 B3GALT5Q9Y2C3 310 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 TRAV9-1A0A075B6T8 112 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 PRR32B1ATL7 298 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 P2RY10O00398 339 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 TNFSF11O14788 317 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 PITX3O75364 302 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 FCN3O75636 299 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 ECI1P42126 302 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM108Q6UXF1 575 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 KLHDC1Q8N7A1 406 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 STXBP6Q8NFX7 210 aa5.75□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM189A5PLL7 270 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 OR11H12B2RN74 326 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 HS3ST1O14792 307 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 PSG1P11464 419 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 TAS2R30P59541 319 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 WDR38Q5JTN6 314 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 CRIP3Q6Q6R5 217 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 OR11H1Q8NG94 326 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 OR4P4Q8NGL7 312 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 OR11H2Q8NH07 326 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ABHD14BQ96IU4 210 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 MOB1AQ9H8S9 216 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF705FA8MVS1 300 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 SRSF10O75494 262 aaKnown RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 CSN2P05814 226 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF705DP0CH99 300 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF705BP0CI00 300 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF20P17024 532 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 S100A7P31151 101 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 HNRNPA3P51991 378 aaKnown RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ODF1Q14990 250 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 SELENOHQ8IZQ5 122 aaKnown RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 C17orf78Q8N4C9 275 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 FAM46BQ96A09 425 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 SH3BGRL3Q9H299 93 aa5.74□□□□□ -1.49
CSDE1-204ENST00000369530 ZMAT3Q9HA38 289 aaKnown RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 CGGBP1Q9UFW8 167 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-204ENST00000369530 CXCL13O43927 109 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 NUPR1O60356 82 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 CTSDP07339 412 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-204ENST00000369530 PPOXP50336 477 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 EFNB3Q15768 340 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 NUP37Q8NFH4 326 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 KCNK17Q96T54 332 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 ULBP2Q9BZM5 246 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 HHLA2Q9UM44 414 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 OR51B2Q9Y5P1 312 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 ANKRD17O75179 2603 aaKnown RBP5.73□□□□□ -1.49
CSDE1-204ENST00000369530 GAGE12BA1L429 117 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 ADH4P08319 380 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 CEBPDP49716 269 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-204ENST00000369530 FOXL1Q12952 345 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 RNPS1Q15287 305 aaKnown RBP5.73□□□□□ -1.49
CSDE1-204ENST00000369530 C16orf82Q7Z2V1 217 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 CDC20BQ86Y33 519 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 FER1L6-AS1Q8NA97 138 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 OR13C9Q8NGT0 318 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 OR52N5Q8NH56 324 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 CMTM2Q8TAZ6 248 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 SPACA5Q96QH8 159 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 TM2D1Q9BX74 207 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 C1orf123Q9NWV4 160 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 ARFGEF3Q5TH69 2177 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 NBASA2RRP1 2371 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 IGKV1D-43A0A0B4J1Z2 117 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 VENTXO95231 258 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 BCL2P10415 239 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 AADACP22760 399 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 CRYBA4P53673 196 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 CSNK2A1P68400 391 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-204ENST00000369530 OR52M1Q8NGK5 317 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms